Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1351 |
Symbol | surE |
ID | 8367782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1589196 |
End bp | 1589966 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644983778 |
Product | stationary phase survival protein SurE |
Protein accession | YP_003141458 |
Protein GI | 256820179 |
COG category | [R] General function prediction only |
COG ID | [COG0496] Predicted acid phosphatase |
TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAAAAC CTTTAATATT AGTAACAAAC GACGACGGTA TTACCGCTCC TGGTATCCGT TATCTGATAG ACATAATCAA AGAATTAGGC GAAGTGGTGG TAGTAGCCCC CGATTCGCCA CAGAGTGGTA AAGGGCACGC CGTTACCCTC GATACTACTA TGTACTGCGA CCCTATGCCC TCACATAACG GAGCTACTCG CGAATACGCT TGTAGTGGTA CACCTGCCGA CTGTGTGAAA ATTGCCAAAC ACGAAGTGCT GAATGGTCGT CTGCCCGATC TCTGTGTGAG TGGTATCAAT CACGGTTCCA ATGCTTCTAT CAACGTGATA TATTCAGGAA CGATGAGTGC TGCTATTGAG GCGGGTACTG AGGGCATTCC TGCTATTGGT TTTTCATTAT TAGACTCCAG TTGGAATGCT GATTTTTCGC AAGCACGTGC TTATATAAAA CATATAGCCG AAAAAGTACT CACTAATGGT TTACCCAAAG GAATAGTGCT AAATGTGAAT ATACCTAATA TCAAGAAGGA AGAAATAAAA GGCGTAAAAG TATGCCGTCA AGCACGTTCG CGCTGGATAG AAAGTTTTGA CAAACGTGTG AACCCGCAAG GAAGAGTGTA CTACTGGATG ACAGGTACTT TTGTGAATGA AGACCAAGGT ACTGATACTG ACCAATGGGC TCTCGAAAAC GGCTACATTT CAGTAGTGCC TATTCAATTT GACCTTACGG CTCACCAAAA TATTCAAGAG TTAAAGCAAT GGGATTTTTA A
|
Protein sequence | MQKPLILVTN DDGITAPGIR YLIDIIKELG EVVVVAPDSP QSGKGHAVTL DTTMYCDPMP SHNGATREYA CSGTPADCVK IAKHEVLNGR LPDLCVSGIN HGSNASINVI YSGTMSAAIE AGTEGIPAIG FSLLDSSWNA DFSQARAYIK HIAEKVLTNG LPKGIVLNVN IPNIKKEEIK GVKVCRQARS RWIESFDKRV NPQGRVYYWM TGTFVNEDQG TDTDQWALEN GYISVVPIQF DLTAHQNIQE LKQWDF
|
| |