| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1343 |
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| Symbol | |
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| ID | 8367774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1575817 |
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| End bp | 1578861 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644983770 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003141450 |
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| Protein GI | 256820171 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.253983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA ATCTATTTTT ATCAGTTCTG TTGTTCTTAT TAGTGAGTTG GAGCTATGCG
CAACAACGCA CTATCCGTGG AACTGTCAGC GATGCTACTA CCAAAGAGCC CCTAATGAGT
GCTTCGGTAG TAATTAAAGG AACTAGTAAG GGTGTCAGTA CCGATATGAG CGGTAAGTAT
ACCATAGAGG TATCGGTAGG GCAAACCTTA GAAGTCTCAT TTATGGGTTA TGTAACTCAA
AATGTAAAAG TAACCGCCAA TACACCTTCA CCTTTGAATA TTGCTCTTGC CGAAGAGCAA
AGAAAGTTAG ACGAAGTAGT GGTCGTAGGT TATGGCGTTA CTAAAGTACG TGATTTAGCA
GGTGCTATTA CCTCCATCAA AACCAATGAT GTAAAAGCAG GGGTGGTAGC CGATATGTCA
CAGATGTTAA AAGGTCGTGC CTCAGGAGTA CAAGTGCGCC AAAACTCACT CGAGCCTGGT
GGTAATGTAT CTATCCGTGT ACGTGGTGCT TCTTCAGTAA GTGCCGATAA CGAACCACTC
TACGTAATCG ATGGATTCCA AACAGATAAT ATGTCGCAAA TCAGTATAGA CGACATCGAA
TCAATCGAAA TCTTAAAAGA TGCCTCTACT ACTGCTATTT ACGGAGCTCG TGGTGCTAAT
GGGGTTATCC TTATTACTAC TAAAAAAGGT AAAGAAGGTA GCTTTAATGT AGAGTATTCT
AACCAAACTT CTTATAAGAA TATGTATAAT CCTTGGGATT TGCTCGATGC TGGAGAAACC
ATAGCACTTA CCCGTCGCTT ATATGAACAA ACCCAAGACG CCGCTTATGG CAAATGGACA
GCTCAACAAG CTACCTATCG CGGTAAAGGT ACCGATTGGC TCAAAGAAAC CACTCACGAT
GCCTTTACTG TATTGCATCA ACTTTCTGTA TCAGGTGGTA CTGACCGCTT ATCCGCTTTT
ATGTCAGGTA ACTACCTTAC CGAACCTGGT ATTCTGCTCA ATACCGATTA TAATCGTTAT
GGAGGACGCA TCAATTTGCA GTACAAGATA AGTCCGAAAG TAAGAGCGGG GGCTAATATG
AGTTTTTCCA AATCTAAAAA GAAATTCTTA GATATGGGTA CAGTCTCTTC TGATAAAAAT
ATTATGTATC GTATCTTTAA TTTGGAACCT TGGAAAAATA AAGAAGGTTT CGATGTGTTT
GGAACTAAAG ACCGTCGTCC TGCTGTGTTC GAAGAAATGA GCGGAGCACA ACTCTATCGC
CATTTTAATA CAATGTATGC AACCGCCTAT GCCGATATAG ATTTGTTGCC TTCACTTACT
ATCAATGGTC GTTATACTTA TGCTTATGAC CATTTAAAAA CTGAAAAGTA TTATGACCGT
TCTACTTCTA TAGGTCAGTC TTACAAAGGA CAAGCATTTC TCAGTCACGA AGAAAACGTA
AAACACCAAA TAGAAGGTGT GGCTACTTAT CACCCTAAAA TGGAAGGTAA ACACGATGTA
AAAGTAACCG CAGGTACTTC CTATATTTAT CAAAGAGGTA AAGGAGATGA AGTGCAAGCC
TATGGTTTTG CTTCCGATGT ATTCTCTTTC AAAAATATTG GAGCTGCCCA ACATTTAGAT
TGGATAGGTT CAGGTGAATC CTCAATCAAA AAAGCTTCTG TTTTCGGTCG TGCCGAATAC
ATCTTCAATA ATCGTTATAT TATCAACGCT TCAGTTCGTG CCGATGGTTC ATCAGTGTTC
GGAGCTGACT ATCGTTGGGG TATATTTCCT GCGGGATCTA TCGCTTGGCA CTTAGGAGAA
GAAGAGTTTA TGAAATTTGC TAAACCTCTT TTCTCTCGTA TCAAATTGCG CACTAGCTAT
GGGCTTAGTG GTAACGATGG TATCCGTTTT GGTTTGTCAC AATACCAATA CTCTGTACGC
GATGTGTATA TTGGTAATGA CGTGAACTCT AAAGGTATGT ATCCTTCTAA TCCCTACAAT
CCAAAACTCC GTTGGGAAAC CACTGCACAA TGGAATGCCG GTATCGATTT AGTGGTTGGT
AGAGTAGAAG CCAGCTTCGA TTATTATATC AAACGCACTC ACGACTTGTT AAACCCTGAC
CCTATTCACC CTTCAGGAGG TTTCCCTAAC TATGTGAATG ACGGTCGCCG TTTTGAGTAT
ACCGCAATGA TGGTAAACGA TGGTGAGATT GAAAACCGAG GCTTTGAAGT GGCTATCAAA
TCTACCAATA TCAATAAAAA CGATTTTGTG TGGACTACAG CATTTAACTT CTCTCATAAC
CGTAGTGAGG TATTGAAACT CAACGATGGA AAACCACGTT TTCAGTATAT ACGTCCTCAC
GGTTCTTATG ACGAAAAAGA ATATATGATG CTCAAAGAAG GTGAACCTCT TAGTGCTATC
TATGGTTATG AGTTCGATGG TATCCTTCAA GAAGGTGAAA CTTATGCACC ACAGCCTAAC
TCAGCACCTG GTGACCCTAA GTTTAAAGAC CTCAATGGTG ATGGTAAAAT AGACGAAAAA
GACCGTACTG TATTGGGTAC TGGTATCCCT AAAACTATCA TAGGTCTTAA CAATAGTTTT
ACCTATAAAG GGTTTGACTT CTCTTTCTTC TTTGAAGCCT CATTAGGAGC CAAGATGCTT
AACTTAACTC GTATTTATTT GGAAGATAAT AACCGCCTTT CGGATTCAGC TGACCGTTGG
ACAAAAGCTC ACGCTTCTAA CAGTGTGCCT CGTAATGGTT ATCAAAAAAC AGCCAAATTG
CAATATGGTT CTTATGTAAA CTCTCGTTTT GTAGAAGATG CCGATTTCGT AAAATTGCGC
AATGTTGAGT TAGGATATAC CTTCACAGGC AGTCAATGGA ATATGAAAAC TCTTAAAACA
ATGCGTATGT TTGTAGGAGC TCAAAATTTG CTTACCTTCA CTAAATACCA AGGTTTCGAC
CCCGATATCA GTACCAATGG TAGTAGTGCT ATTGCACAAG GTTTGGATTT GAACTCTTAT
CCTGCTTACA GAACCATTAA CTTTGGAGTG AAATTAACTT TTTAA
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| Protein sequence | MKRNLFLSVL LFLLVSWSYA QQRTIRGTVS DATTKEPLMS ASVVIKGTSK GVSTDMSGKY
TIEVSVGQTL EVSFMGYVTQ NVKVTANTPS PLNIALAEEQ RKLDEVVVVG YGVTKVRDLA
GAITSIKTND VKAGVVADMS QMLKGRASGV QVRQNSLEPG GNVSIRVRGA SSVSADNEPL
YVIDGFQTDN MSQISIDDIE SIEILKDAST TAIYGARGAN GVILITTKKG KEGSFNVEYS
NQTSYKNMYN PWDLLDAGET IALTRRLYEQ TQDAAYGKWT AQQATYRGKG TDWLKETTHD
AFTVLHQLSV SGGTDRLSAF MSGNYLTEPG ILLNTDYNRY GGRINLQYKI SPKVRAGANM
SFSKSKKKFL DMGTVSSDKN IMYRIFNLEP WKNKEGFDVF GTKDRRPAVF EEMSGAQLYR
HFNTMYATAY ADIDLLPSLT INGRYTYAYD HLKTEKYYDR STSIGQSYKG QAFLSHEENV
KHQIEGVATY HPKMEGKHDV KVTAGTSYIY QRGKGDEVQA YGFASDVFSF KNIGAAQHLD
WIGSGESSIK KASVFGRAEY IFNNRYIINA SVRADGSSVF GADYRWGIFP AGSIAWHLGE
EEFMKFAKPL FSRIKLRTSY GLSGNDGIRF GLSQYQYSVR DVYIGNDVNS KGMYPSNPYN
PKLRWETTAQ WNAGIDLVVG RVEASFDYYI KRTHDLLNPD PIHPSGGFPN YVNDGRRFEY
TAMMVNDGEI ENRGFEVAIK STNINKNDFV WTTAFNFSHN RSEVLKLNDG KPRFQYIRPH
GSYDEKEYMM LKEGEPLSAI YGYEFDGILQ EGETYAPQPN SAPGDPKFKD LNGDGKIDEK
DRTVLGTGIP KTIIGLNNSF TYKGFDFSFF FEASLGAKML NLTRIYLEDN NRLSDSADRW
TKAHASNSVP RNGYQKTAKL QYGSYVNSRF VEDADFVKLR NVELGYTFTG SQWNMKTLKT
MRMFVGAQNL LTFTKYQGFD PDISTNGSSA IAQGLDLNSY PAYRTINFGV KLTF
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