Gene Coch_1333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1333 
Symbol 
ID8367764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1549024 
End bp1550055 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content43% 
IMG OID644983760 
Productferrochelatase 
Protein accessionYP_003141440 
Protein GI256820161 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAAAG GAGTATTACT CGTAAATTTA GGATCACCCG ATTCCTTTGC AATAAAAGAC 
GTCAAACGAT ATCTAAAAGA ATTTTTAATG GACGAACGCG TCATCGACCT GCCTTACCTA
TTGCGCTATG CTTTGGTACA CGGGGTTATT CTCAATACGC GTCCACCTAA AACCAGTAAA
GCCTATCAAA AAATATGGTG GAGCGAAGGT TCTCCGCTCA TTGTCATTAG TCGTTGGCTT
ACTGAAAAAG TACAGCGCAA AGTCTCTGTA CCCGTAGTAT TAGCAATGCG TTATGGCAAC
CCAAATATCG CCAATGCACT AAAAGAATTA CACAGCAAAG GAGTTGATGA GGTACTCCTC
ATTCCTCTTT ATCCTCAATA CGCAATGGCT ACTACCGAAA CCATTGAAGT CCTCACCGAA
AAACTCATCA AAGCCTCTTA TCCTAATATG CGCCTCACCA AGTTTCCTGC TTTCTTCCAT
CGCCCCGAGT ATATCGAGGC TTTAGCGCAG GTAGTACGCG CTCATTTAGG GACAGCCCCT
TTCGACCATT TGCTCTTTTC TTATCACGGT GTACCCGAGC GTCATCTCTA CAAAACCACA
CCTACCTCTG CACACAAACA CATTGTAGAA GGTGTAACTT GTTGCGACCC TTACAGCGAA
GAAGGAACAC ACTGCTACCG CAGTCATTGT TTTGAGACTA CTCGCTTATT GGCAGAAAAG
TTAGGATTAG AAAAAGGAAA ATACTCACAA GCGTTTCAAT CGCGTTTGGG GAAGGATAAG
TGGATTACCC CTTTCACTTC CGATAAAATT ATAGAACTTG CCCGAAATGG TGTAAAGAAA
TTAGCAGTCA TCGCTCCTGC CTTTGTCGCC GATTGCGTAG AAACTCTCGA AGAAATAGAA
ATAGTAGGAG GTAAATCTTT CCGCAAAAAT GGTGGTGAAA ATTTTAAAAT GATTCCCTGC
CTCAACGACT CCGACCTATG GGTACAAGCT CTCTCCTCTT GGATTAATGA AGAGACAAGA
GATGAAAGAT AA
 
Protein sequence
MPKGVLLVNL GSPDSFAIKD VKRYLKEFLM DERVIDLPYL LRYALVHGVI LNTRPPKTSK 
AYQKIWWSEG SPLIVISRWL TEKVQRKVSV PVVLAMRYGN PNIANALKEL HSKGVDEVLL
IPLYPQYAMA TTETIEVLTE KLIKASYPNM RLTKFPAFFH RPEYIEALAQ VVRAHLGTAP
FDHLLFSYHG VPERHLYKTT PTSAHKHIVE GVTCCDPYSE EGTHCYRSHC FETTRLLAEK
LGLEKGKYSQ AFQSRLGKDK WITPFTSDKI IELARNGVKK LAVIAPAFVA DCVETLEEIE
IVGGKSFRKN GGENFKMIPC LNDSDLWVQA LSSWINEETR DER