Gene Coch_1332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1332 
Symbol 
ID8367763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1548393 
End bp1548938 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content41% 
IMG OID644983759 
Producthypothetical protein 
Protein accessionYP_003141439 
Protein GI256820160 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATT ACCTTATTGC TAAAAGCATA CATATCATCT TTGTAGTGAG CTACTTCGCA 
GGGCTTTTCT ATATGGTGCG ACTATTTATC TATCACACCG AAGCCTTGGA AAAAGATGAC
CCCGAACGCT CAATTCTCCA CAAACAATTC AGCTTTATGG AAGAGCGCTT GTGGAACATC
ATTACCGTGC CGGCGCTGGT GCTGATGACT CTTAGCGGAC TCTATATGCT ATACGACGAT
GGCGAGTGGA CGCTTATTAA ACAAGGATGG TTTCACGTCA AACTGCTATT CATCGCCTTT
TTGTTTGTAT ATCATTACTA TTCTTGGCGC ATAATGAAAC GACTCCAAGC GGGTCGCGCC
TCTCTTACTT CGGTACAACT GCGAATGCTC AACGAAATAG CGACAATTAT CCTCTTTGTA
GTGGTTTTCG CCGTGATACT AAAAGGCTTA TTCATCACCT ATTGGTATTT TTCTTTAATA
GCTTTTGTAG TAATGGGAGC TCTGATAATG TTAGTAGTGA AATTGGTAAA TAAAGGAAAG
AATTAG
 
Protein sequence
MTDYLIAKSI HIIFVVSYFA GLFYMVRLFI YHTEALEKDD PERSILHKQF SFMEERLWNI 
ITVPALVLMT LSGLYMLYDD GEWTLIKQGW FHVKLLFIAF LFVYHYYSWR IMKRLQAGRA
SLTSVQLRML NEIATIILFV VVFAVILKGL FITYWYFSLI AFVVMGALIM LVVKLVNKGK
N