Gene Coch_1330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1330 
Symbol 
ID8367761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1544947 
End bp1545966 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content42% 
IMG OID644983757 
Productconserved hypothetical protein, secreted 
Protein accessionYP_003141437 
Protein GI256820158 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAC TCATTGTTCT ACTGTTTCTT ACCTCCTTTA CCGCTTTTGG GCAAGTGCGC 
AAAGCAAGAA CGTACGAAGC CCCTGTAAAG TCCGATACGG TAAAGGTAAT GAAAGATACC
GAAGCGTTAA AGTTCACTTT CAACCGTTTT AAATTAGCAC AACAAAAATG GTTCAAATTC
AATCAAGTGA GCCTTAATAT GAGCGAGGTA GCTTTTTCTA ATTGGAGTGC AGGAGGAGAA
AGTTCTATTT CGGGGATATT TAATGCCAAA TTCCGTCGCC GTTATACCGA ACGCACTTTC
TTTTGGGACA ACGAATTAGA AATCAACTAC GGTATTAATG CTCAAAAAGG ACGCGAAGTG
CGCAAGACCG ACGATAAACT CTCACTCATC TCATCGTTTG GCTATCGAGG CGACTCACAG
TCGTTTTGGT ATTACACGGC GCGCTATCAG TTTCTTTCAC AAATCAGCAA CGGGTACAAC
TATCCCGATG TAGAAAAACC TATCTCCAAA TTCTTTGCCC CTGCTTATAT CACCTTTGGT
TTGGGTACTG AATATGCGCC TTCAAAGATA AAATTCAGTA TTTTCCTTTC GCCTATCACG
CTTAAAACTA CTGCTGTACT CGACCAACGT TTAGCCGATG AAGGTGCTTT CGGGGTAGAA
AGAGCCCAGC GTGCTCCTGA CGGTACTATT CTGAAGAAAG GTAAGCGTAC TCATAACGAA
CTGGGTTTTT CAGTGTCCGG TCGCTGGGAC AAGAAAGTGA TGGAGAATAT GATACTCAAT
ACTTCCTTCA ACTTCTATGG CGATTACCTT AAAAACTTCG GAAATATAGA TGTGGATTGG
GAAACTAATC TCAACTTAAA GGTAAATAGT TACGTGCAAG CGCGTATAGG GGTGCATATC
AAATACGACG ACGATGTGAA GTTTTATTCC TACAAAGCAC CTAATGGTGA AGTGTACAAC
TATGGCGCGC GCACTCAATT CAAGCAAGTA TTAGGAGTAG GAGTACTATA TACTTTTTAA
 
Protein sequence
MKKLIVLLFL TSFTAFGQVR KARTYEAPVK SDTVKVMKDT EALKFTFNRF KLAQQKWFKF 
NQVSLNMSEV AFSNWSAGGE SSISGIFNAK FRRRYTERTF FWDNELEINY GINAQKGREV
RKTDDKLSLI SSFGYRGDSQ SFWYYTARYQ FLSQISNGYN YPDVEKPISK FFAPAYITFG
LGTEYAPSKI KFSIFLSPIT LKTTAVLDQR LADEGAFGVE RAQRAPDGTI LKKGKRTHNE
LGFSVSGRWD KKVMENMILN TSFNFYGDYL KNFGNIDVDW ETNLNLKVNS YVQARIGVHI
KYDDDVKFYS YKAPNGEVYN YGARTQFKQV LGVGVLYTF