| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1262 |
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| Symbol | nusA |
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| ID | 8367692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1472227 |
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| End bp | 1473459 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644983691 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_003141371 |
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| Protein GI | 256820092 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGTC TTGAATTAAT CGAATCATTC TCGGAGTTTA AAGATGATAA ACTCATCAAC
CGCGAAACCT TGATGGCTAT TTTGGAAGAG GTTTTCCGCA ATACCCTAAA AAAGAAATAT
GGCTCTGACG ATAATTTCGA TATTATTATC AACCCCGATA AAGGCGACCT ACAAATCTTC
CGTAACCGTG TGGTAGTGGA AGACGGTGCA GTAACGAATG ACAATCAGCA AATTGAACTT
TCGGTGGCTC GCAAAATTGA ACCCGACTTT GAGGTGGGGG AAGACGTTTC AGAAGAAATT
AAAATTGATG ACTTGGGCCG CCGTGCTATA TTGGCATTGC GCCAAAACTT GATTTCTAAA
ATTCACGAAT ACGATAGTAT GACTATTTAT CAGCGTTTCA AAGACCTGAT AGGTCAGCTA
TACGTAGCCG AAATACACCA TATCCGCCAC AAAGCCATCA TCTTGTTAGA CGACGAAGGC
AATGAGATTA TCCTTCCTAA GGAAAAACAA ATTCCGTCGG ACTTCTTTAA GAAAGGTGAG
CACGTGCGCG GAATTATCGA ATCAGTAGAG CTGAAAAGTA CCAAACCTAC CATTATTATG
TCGCGTACCT CTCCTCTATT CTTGGAGCGT TTGTTCGAAC AAGAAATCCC CGAGATTGCC
GACGGGCTTA TCACTATTAA CAGGGTGGTA CGTATCCCAG GAGAGAAAGC AAAAGTGGCT
GTAGATTCAT TCGACGATCG TATTGATGCG GTAGGTGCGT GCGTAGGTGT GCGTGGGTCT
CGTATTCACG GTATTGTGCG CGAGTTGGGC AATGAGAATA TCGATGTATT ACCATTCACC
AATAACCCAC AACTGCTCAT CACCCGTGCT TTGGCTCCTG CGCGTGTATC TTCAGTGGTT
ATCAACGAAG AAGAAAAACG TGCTGATGTG TATTTAGCAA ATGAAGAAGT TTCGAAAGCC
ATTGGTAAAT CGGGCTATAA CATTCGCTTG GCGAGTCAGC TTTCAGGCTA TGAAATCGAT
GTATATCGCG AAGGGGCAAC CGAAGAAGAT ATCGAGCTTA GCGAGTTTAA CGACGAAATT
GAAGAATGGG TGATTGAAGA ACTGCAAAAA GCAGGACTTG ATACAGCTAA GAGTGTATTG
GAACTTTCTG CCGAAGATCT AATGCAACGC ACTGACCTCG AAGAAGAGAC TGTAAACGAA
GTGCTACGCA TTTTGGCGGA AGAGTTTGAA TAG
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| Protein sequence | MNSLELIESF SEFKDDKLIN RETLMAILEE VFRNTLKKKY GSDDNFDIII NPDKGDLQIF
RNRVVVEDGA VTNDNQQIEL SVARKIEPDF EVGEDVSEEI KIDDLGRRAI LALRQNLISK
IHEYDSMTIY QRFKDLIGQL YVAEIHHIRH KAIILLDDEG NEIILPKEKQ IPSDFFKKGE
HVRGIIESVE LKSTKPTIIM SRTSPLFLER LFEQEIPEIA DGLITINRVV RIPGEKAKVA
VDSFDDRIDA VGACVGVRGS RIHGIVRELG NENIDVLPFT NNPQLLITRA LAPARVSSVV
INEEEKRADV YLANEEVSKA IGKSGYNIRL ASQLSGYEID VYREGATEED IELSEFNDEI
EEWVIEELQK AGLDTAKSVL ELSAEDLMQR TDLEEETVNE VLRILAEEFE
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