| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1211 |
|---|
| Symbol | |
|---|
| ID | 8367634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 1417499 |
|---|
| End bp | 1418422 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644983635 |
|---|
| Product | peptidase M48 Ste24p |
|---|
| Protein accession | YP_003141322 |
|---|
| Protein GI | 256820043 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATATC TTGGTATCCG ACAACAAATC GCACGAAATA ACACCAAGTC TGTTCTGTAT
TTATTAGCCT TCCCCTTGCT AATCCTTGCG GGAACCTATG CGGTATTGTA TATGCTTAAC
GACCAAGATA TAGAGGCTGT AAATGCTCAA TTCCTTTCAG TAGTCCCTGT GGTGCTGATA
GGGGTAGCTA TATGGTTTGT AATCTCCTAC TTCTTCAATA CCCAAATGAT ACAAACCGCC
ACTCACTCTC GTCCCTTAGA ACGCCGTGAG AATATGCGGG TGTATAATCT CACCGAGAAC
CTTTGTATGA GCGTCGGAAT GCCTATGCCC AAGCTCTATA TTATAGAAAG CGATGCGCTC
AATGCTTTTG CTTCCGGTAT CAACCAAAAA ACCTTTGCCG TCACCCTTAC ACGTGGTATT
ATCAACACGC TTAACGACGA CGAACTCGAA GGGGTGATAG CTCACGAACT TACCCATATC
CGCAACCGCG ATGTCCGTTT GCTTATTATT ACCATTGTGT TTGTAGGTAT TTTTGCCACT
ATTGCCAATA TCGCTTTCCG CACGATGCTC AATAGTCAGT TGTATTCTTC ACGCAATAGG
CGAAACGAAA AGGGTGGGGG AGGAGCTGTT GTGCTGGTAG TCTTATTGGT AGCAGGGGTT
GTCTATTTCT TTTCAATACT CTTTAAGTTG GCACTTTCTC GCAGTCGCGA ATATATGGCT
GATGCAGGAG CTGTTGAAAT GACCCATAAG TCTTTGGCAT TAGCCAATGC CTTAAAGAAA
ATCTCAGGGC ACTCCACCAT CGAAGGTGTG GATAACGACG AAGTAAAAGA ACTCTTCATC
GACTATAAAG CCGAAGGCTT TTTTGCAATG TTCGCCACCC ACCCACCTAT TCGCAAACGC
ATACAAGTAT TAGAGCAATT TTAA
|
|---|
| Protein sequence | MQYLGIRQQI ARNNTKSVLY LLAFPLLILA GTYAVLYMLN DQDIEAVNAQ FLSVVPVVLI
GVAIWFVISY FFNTQMIQTA THSRPLERRE NMRVYNLTEN LCMSVGMPMP KLYIIESDAL
NAFASGINQK TFAVTLTRGI INTLNDDELE GVIAHELTHI RNRDVRLLII TIVFVGIFAT
IANIAFRTML NSQLYSSRNR RNEKGGGGAV VLVVLLVAGV VYFFSILFKL ALSRSREYMA
DAGAVEMTHK SLALANALKK ISGHSTIEGV DNDEVKELFI DYKAEGFFAM FATHPPIRKR
IQVLEQF
|
|---|
| |