Gene Coch_1199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1199 
Symbol 
ID8367622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp1406773 
End bp1407471 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content41% 
IMG OID644983623 
Productzinc/iron permease 
Protein accessionYP_003141310 
Protein GI256820031 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.248468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTATC TTCTCCCTTT TCTGGCAGTA GTATTAGGCT ACTCATTCGT TACCTTTTTT 
AAACCTGCCC AACAACAATA CACCAAATTA CTACTCTCTT TCAGTGGCGC TTACCTATTG 
GCACTCACTG TATTCGTGCT GATACCCGAA GTATATCACT CTCACGATGA GCACACGCAA 
GATTTTAAAT ACATAGGACT TTTTGTGATA GTAGGAGTAC TCTTGCAAAT TGTCTTAGAG 
TTCTTTTCGC ACGGAGCCGA ACACGGCCAC ACCCAGCACC CACACCCACA CCAGCATAGT 
GCTTTTCCTC TCTCACTGTT TATCAGCCTT AGTATTCACT CGATTTTAGA AGGTTTCCCG 
CTATCTCACG GACATAATCA CGACCTTGTG TATGGTATAT TCGTGCACAA ACTGCCTGTG 
GCTATTGTGC TCACTACTTT TTTTGTGAAT TCGGGGGTGA ACAAGTGGAA GACAGCACTG 
TTTTTACTCT TTTTTGCCCT AATGACGCCA TTAGGCACTT TTTTAAGTAA TACAGTACCA 
AGCCTTGTCA ATTACCAAAC GGAGCTTTCG GCTATTGTAA TAGGTATTTT CTTGCATATT 
TCTACCGTTA TCTTATTTGA AAACTCCGAA GGACATCGCT TTAACCTATT AAAGTTTTTA 
AGTGTTTGTG TGGGATTTGT GGTAGCGTAT CTTACTTAG
 
Protein sequence
MNYLLPFLAV VLGYSFVTFF KPAQQQYTKL LLSFSGAYLL ALTVFVLIPE VYHSHDEHTQ 
DFKYIGLFVI VGVLLQIVLE FFSHGAEHGH TQHPHPHQHS AFPLSLFISL SIHSILEGFP 
LSHGHNHDLV YGIFVHKLPV AIVLTTFFVN SGVNKWKTAL FLLFFALMTP LGTFLSNTVP 
SLVNYQTELS AIVIGIFLHI STVILFENSE GHRFNLLKFL SVCVGFVVAY LT