Gene Coch_1166 details

Gene Information

• Locus tag: Coch_1166
• Symbol: rplO
• ID: 8367588
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 1379689
• End bp: 1380141
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 644983592
• Product: 50S ribosomal protein L15
• Protein accession: YP_003141280
• Protein GI: 256820001
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0337918
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTTGA GTAATTTACA ACCCGTACAG GGTTCAATTC ACAGAGAAGG GAAGCGCGTA 
GGCCGCGGTC AAGGTTCCGG TAAAGGTGGA ACCGCTACCC GTGGTCACAA AGGAGCTAAA 
TCTCGTTCAG GCTTTTCTAA TAAGATTGGC TTCGAAGGTG GACAAATGCC CCTCCAAAGA 
CGCGTACCAA AATTCGGTTT CAAAAACTTT AACCGTAAAG AATATGTAGG TATCAACTTG 
GGTAGACTAC AAGAACTCGT TGATAATGGT AAAATTACTG ATAAAGTAGA CCTTGAAACC 
TTAGTTCAAC TAAACCTCGC TAAAAAAACC GACTTGGTTA AAATTTTAGG AGGTGGAGAA 
CTAAAATCTA AATTAAAAAT ATCTGTTCAT AAGTTTACTG CAAGTGCTAA AGCCGCTATC 
GAAGCTGCTG GTGGCGAAGC AGTAACCTTG TAA 

 

Protein sequence

MNLSNLQPVQ GSIHREGKRV GRGQGSGKGG TATRGHKGAK SRSGFSNKIG FEGGQMPLQR 
RVPKFGFKNF NRKEYVGINL GRLQELVDNG KITDKVDLET LVQLNLAKKT DLVKILGGGE 
LKSKLKISVH KFTASAKAAI EAAGGEAVTL