| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1161 |
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| Symbol | rpsH |
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| ID | 8367583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1377617 |
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| End bp | 1378015 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644983587 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_003141275 |
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| Protein GI | 256819996 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000284312 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATACAG ATCCTATCGC AGATTATTTA ACAAGAATTA GAAATGCTAA TAGCGCTGGT
CACAGAGTTG TTGAGATCCC AGCCTCTAAA CTCAAAAAGG AAATTACTAA AATCCTTTTT
GACCAAGGGT TCATCCTTAG CTATAAATTT GATGACTCTA CCGTACAAGG TACCATCAAA
ATAGCTTTGA AATACGACAA AGTGACCAAA GAGCCTGTTA TTAGGCATAT TGAAAGAGCC
AGCCGTCCAG GTCTGAGAAA GTACGCTGGC GCTGATAACT TACCTCGCGT ATTAAACGGA
TTGGGTATCG CTATTATCTC TACATCACAA GGCGTGATGA CAGGTAAAAA AGCTAGAGAA
CTCAATATCG GTGGAGAGGT AATTTGTTAC GTTTACTAA
|
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| Protein sequence | MYTDPIADYL TRIRNANSAG HRVVEIPASK LKKEITKILF DQGFILSYKF DDSTVQGTIK
IALKYDKVTK EPVIRHIERA SRPGLRKYAG ADNLPRVLNG LGIAIISTSQ GVMTGKKARE
LNIGGEVICY VY
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