| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1153 |
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| Symbol | rpsC |
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| ID | 8367575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1374413 |
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| End bp | 1375153 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644983579 |
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| Product | 30S ribosomal protein S3 |
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| Protein accession | YP_003141267 |
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| Protein GI | 256819988 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0092] Ribosomal protein S3 |
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| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000018962 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGACAAA AGACAAATCC AATCGGAAAT CGCCTAGGAA TTATCAGAGG ATGGGAGTCT
AACTGGTATG GAGGCAATGA TTACGGAGAT AAACTCGCTG AAGACGATAA AATCAGAAAA
TATGTTCTCG CTCGTTTATC TAAAGCTAGT GTTGCTCACG TGATTATCGA ACGTACTTTC
AAACTTGTAA CCGTTACTAT CACCACCGCT CGCCCTGGTA TCATCATCGG TAAAGGCGGT
CAGGAGGTAG ACAAGTTGAA AGAAGAACTT AAGAAAATCA CCGGTAAAGA CATCCAAATT
AACATTTTTG AAATCAAACG CCCTGAACTT GATGCTGCTC TCGTAGCTGC AAGCATCGCT
CGCCAAATCG AAGGTCGTGT TTCTTACAAA CGCGCTATCA AAATGGCTAT CGCTTCTGCT
ATGCGTATGA ACGCCGAAGG TATCAAGGTA ATGATTTCAG GTCGTTTGAA TGGAGCTGAA
ATGGCTCGTT CCGAAAGCTT TAAAGAAGGT CGTATCCCTC TTTCAACCTT TAGAGCTGAT
ATCGATTACG CTATTGACGA AGCTCACACT ACATACGGTC GTATGGGAAT CAAAGTGTGG
ATTATGAAAG GCGAAATCTA TGGTAAAAGA GAACTATCAC CACTCGTAGG TATGACTAAA
AAAGCCACTG GTGGAAATTT CTCTGGTAAA TCAACTGACA AGCCTACTGG TGCACCCAAA
AGAGCGCGTC GCAAAAAGTA A
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| Protein sequence | MGQKTNPIGN RLGIIRGWES NWYGGNDYGD KLAEDDKIRK YVLARLSKAS VAHVIIERTF
KLVTVTITTA RPGIIIGKGG QEVDKLKEEL KKITGKDIQI NIFEIKRPEL DAALVAASIA
RQIEGRVSYK RAIKMAIASA MRMNAEGIKV MISGRLNGAE MARSESFKEG RIPLSTFRAD
IDYAIDEAHT TYGRMGIKVW IMKGEIYGKR ELSPLVGMTK KATGGNFSGK STDKPTGAPK
RARRKK
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