| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1139 |
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| Symbol | |
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| ID | 8367561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1357890 |
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| End bp | 1361084 |
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| Gene Length | 3195 bp |
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| Protein Length | 1064 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644983565 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003141253 |
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| Protein GI | 256819974 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.278361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA AGTATTTAAC ATTTGTTATG TTTGTGTTAA GTTGCTTTTT AACAACTCTT
ATGGCACAAA CCATCTCAGT AAAAGGTAAA GTTACTGACG ATAAGAAAAC GCCTTTACCC
GGAGTTTCCG TAGTGGTTAA AGGCTCCACG CACGGTACAT CTACTGATTT TGACGGTAAT
TACCAAATCC AAGCCAAAGC AGGCGATGTG CTTGAGTTTA GCTTTGTAGG GTTTACTACC
CAGACTAAAA AAGTTGTAGG GGGGGGGAAT TCTTATACAG TTAATGTACA ACTAAAAGAA
GATACCCAGC AACTCAGCGA AGTGGTAGTG GTGGGGTTTG CCACTCAAAA GAAAGAAAAC
CTTACAGGTG CAGTAACCTC AGTAGATTCC AAAGCATTAG AGAATCGCCC CGTAAACAAC
GTAACCCAAG CCTTACAAGG AAACGTTTCG GGGTTGAACT TTTCGGTAGG AAATGGAGGT
GGACAGTTGG ATAGTAACCT TTCATTCAAC ATTCGCGGAA CAGGTACTAT TGGTTCAGGT
TCTAGTGGTA GTCCGTTAGT ACTTATAGAT GGTATGGAAG GCGATATGAA TACTTTAAAT
CCTAATGATA TAGAAAGTAT TTCGGTATTG AAAGATGCAG CTTCGGCTTC TATTTATGGG
TCTCGTGCAG CTTTTGGGGT GATTTTGGTA ACTACTAAAT CAGGTAAAGA TGGTAGAATG
ACAATGAATT ATAGTACCAA TTACCGTCTT GCCTCACCAG TAGGTATCCC TAATATGTTG
GATTCAGAAA GTTTTGCTTA TTACTTCAAT GAAGCTCAAA AGAATAACGG AGGAGCTCCT
GTATTTGAAG ATCGTATTGT GCAGAATATC AAGGCATATA AAGCAGGATT GCTAAAAGAT
GCTACCGATT GGAACCCAAC CAAAGATGGA AACGGTGCTT GGAATGACTA CAAGCAAAGT
TGGGCTAATG TAGATTGGTT TAAAGAGTTT TATAGAACTT CTGCTCCTTC ACAAGAGCAT
AATTTCACAG CTCGTGGAGG TACTGAAAAG ATAAAATATT ACGTGTCATT AGGTTGGCTT
GATGCTGAGG GATTATCTCG CTATAATACC GATAAAATGT CGCGTTATTC AGCACAAGGG
AAAATATCAG CACAAATACT TCCTTATTTA AAGTTGGATT ATAATTCCCG TTTTAGTCGT
ATAGATTTCT CCCGTTCTTC TTATTTAGGA GGATTATTTT TCCACAATAT AGCAAGACGT
TGGCCTACTT TGCCACTCAA AGATCCCAAT GGGCATTATA TGAATGGTAA TGAGATAGCA
CAGCTTAATG AAGGACGCGA TAAAACACAA AGTGATGAAC TTACCCAACA ATTAGCTTTG
GTATTCAACC CTATAAAAGG ATGGGTAACC AATGTAGAGC TCAACTATCG CACTTCTACT
GTCTTTAATA ATTGGTACTA CTTGCCTATC TACAAATATG GCTTACACGG AGAGCCTATT
GCTATCTCAC GTGATGGTTC AGCACCTGCA GGTCATTCAA AAATAAGTGA AGCAGCAGGG
CGTTATAACT TCTTTAATAC CAATATTTAT TCATCTTACA CAAAAGAAAT TGAAAAACAT
ACGGTTACTG TTTTAGCAGG GTTTCAATCT GAACTAAACA AAACACGTCA TTTTTGGGCT
TCTCGTGATG GTTTGTACAG CAAAAACTCT CTTTCACTGA ACACCTCAGG AGGAAAAAAT
GATGATGTAG GAGGTGATTA TCAACACTGG TCAACCGCAG GTTTCTTTGG TAGGATCAAC
TACAATTATG ACAGCAAATA CTTATTGGAA GTGAATGCTC GTTATGACGG TAGTAGCCGT
TTCTTGCGCG ACCAACGTTG GAACTTGTTT ACTTCAGCTT CTGTCGGTTG GAATATTGCC
AAAGAAAGCT TTTGGGAACA CCTTGGCAAA TTTGGTGAAG CGGTAAGTGA GTTTAAGCTA
AGAGGTTCTT ATGGAGAATT GGGTAACCAA AATACTGATA GCTGGTATCC TTTCTATCAA
ACAATGAATA TAGGGGCTAA CAATGGTAAT TGGCTACTCA ATGGAGATAA GACCAATACA
GCCTACGCTC CAGGGTTAAT AGCCTCTACT CTTACCTGGG AAAAAGTAGC TTCTTGGAAT
GCTGGTTTTG ACCTAACAGC TTTAAAAAAC CGTTTTAAGT TTACTTTTGA ATTGTTTAGC
CGTAAAACCT ATAATATGGT AGGTCCTGCA CCAGAACTTC CTCCTGTATT GGGTACTTCT
CCTGCTCGTA TCAACAATAC CGATATGGTA TCAAACGGAT TTGAAATTAT AACCAGCTGG
AATGACAAAA TAGGAGAAAA TTTCTCGTAC AACATTAAAG CTAATCTTAC CGACAGCCGT
CAAAAAATTA CAAAATACCC TAACAAGAAT AACTCCTTAG GAAATTATTA CGAAGGACAG
TATTTGGGTG AAATATGGGG CTACCAAACA CGTGGCATTG CTAAAACAGA TGCAGAGATG
ACCGAATGGT TAAAAACACA CGACCAAAGT GCTTTGGGTA ACAACTGGGC AGCAGGTGAT
ATAATGTATG AAGACCTCAA TGGTGATGGT AAAATCAACG GAGGTTCTAA TACTGTGGGT
GACCCAGGTG ATAGAAAAAT TATAGGAAAC ACTACTCCTC GCTATAATTT TGGACTACTT
GTTGATTTGA AATACAAAAA CGTATATTTC AGTATGTTTT GGCAAGGTAC AGGTAAGCGC
GATTTAATCT TCAACGACTC TCCTTATTTT AGAGGAGCTA ACCAAAACGT ATGGCAATCA
GCAGGCTTTA AAGAGCATTT AGATTACTTC CGTCCCGAAG GTACTGACAG TCCTTTTGGT
ACTAATGTAG ATGCGTATTA CCCACGTCCT ACTATGGACG GTGGAGGAAA GAACTTTGTG
GGTCAAACCC GTTGGGTACA AAATGCAGCC TATGTGCGTT TGAAAAATAT ACAATTAGGT
TATGACTTCC CTTCTGATAT TATGAAAACT ATTGGTATAG ACAATTTGCG AATTTATATC
TCAGCCGATA ACGTATTTAC CTTTACCAAA CTCTCTAAGA TATTCGACCC AGAAGCCAAT
GGAGGTTCTT GGGGACAAGG CAAGCTATAC CCTCTTTCAA GAGTGATTTC AACAGGATTA
AGTTTAACCT TCTAA
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| Protein sequence | MKRKYLTFVM FVLSCFLTTL MAQTISVKGK VTDDKKTPLP GVSVVVKGST HGTSTDFDGN
YQIQAKAGDV LEFSFVGFTT QTKKVVGGGN SYTVNVQLKE DTQQLSEVVV VGFATQKKEN
LTGAVTSVDS KALENRPVNN VTQALQGNVS GLNFSVGNGG GQLDSNLSFN IRGTGTIGSG
SSGSPLVLID GMEGDMNTLN PNDIESISVL KDAASASIYG SRAAFGVILV TTKSGKDGRM
TMNYSTNYRL ASPVGIPNML DSESFAYYFN EAQKNNGGAP VFEDRIVQNI KAYKAGLLKD
ATDWNPTKDG NGAWNDYKQS WANVDWFKEF YRTSAPSQEH NFTARGGTEK IKYYVSLGWL
DAEGLSRYNT DKMSRYSAQG KISAQILPYL KLDYNSRFSR IDFSRSSYLG GLFFHNIARR
WPTLPLKDPN GHYMNGNEIA QLNEGRDKTQ SDELTQQLAL VFNPIKGWVT NVELNYRTST
VFNNWYYLPI YKYGLHGEPI AISRDGSAPA GHSKISEAAG RYNFFNTNIY SSYTKEIEKH
TVTVLAGFQS ELNKTRHFWA SRDGLYSKNS LSLNTSGGKN DDVGGDYQHW STAGFFGRIN
YNYDSKYLLE VNARYDGSSR FLRDQRWNLF TSASVGWNIA KESFWEHLGK FGEAVSEFKL
RGSYGELGNQ NTDSWYPFYQ TMNIGANNGN WLLNGDKTNT AYAPGLIAST LTWEKVASWN
AGFDLTALKN RFKFTFELFS RKTYNMVGPA PELPPVLGTS PARINNTDMV SNGFEIITSW
NDKIGENFSY NIKANLTDSR QKITKYPNKN NSLGNYYEGQ YLGEIWGYQT RGIAKTDAEM
TEWLKTHDQS ALGNNWAAGD IMYEDLNGDG KINGGSNTVG DPGDRKIIGN TTPRYNFGLL
VDLKYKNVYF SMFWQGTGKR DLIFNDSPYF RGANQNVWQS AGFKEHLDYF RPEGTDSPFG
TNVDAYYPRP TMDGGGKNFV GQTRWVQNAA YVRLKNIQLG YDFPSDIMKT IGIDNLRIYI
SADNVFTFTK LSKIFDPEAN GGSWGQGKLY PLSRVISTGL SLTF
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