| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1136 |
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| Symbol | |
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| ID | 8367558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1354035 |
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| End bp | 1354691 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644983562 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003141250 |
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| Protein GI | 256819971 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAACCG ATAAAAGCAT AGAGGAAATA GCACAGGAAT ACATTCCACA CTTAAAAATC
TTAGAAGAAG CAGGTAGTTT TGCTGTTTTT CTGTTAGATA GATTCGGTCG TTACTATTAT
GTAACCGAAT ATGTAACCGA AGATATTCAA GCTTCTGATA AACTCAATAT TGAGAAATTG
GTGTATCCCG ATGATTTAGA AGTGGTAAGA CGAATTGATA AAAAAGTATG GGAGTTTTTG
GACACGCTCC CCGAGGAAGA AAAGCTAACT TACAAATATA TCTATGAAAT GAGAGTCTTG
GATAGAGGAA AGTATGTACG AATGATTTAC CAAATGCGCA TATTAGCCTT TAAAGACGAT
AATTTTCTCG GAATGGGCAT CATAGACCTC GCTCCTGAAC AATCGGCAAA CACTTCTGTC
CGCTTTCAGA TAAAAAACTG CCTTACCGAT GAGATTGTAC CTTTTGCTAT CGAAAGTGCT
ACTAATACCC TCCTCACCCC ACGCGAGAGA GAAATACTCG CCCTTGCCAA AGAGGGAATG
TTCAGTAAAG AAATCTCCGA AAAATTGAAC ATCAGCGTAC ATACCGTAAA CCGCCACCGC
CAAAATATCC TCGAAAAACT ACAAGTAGGT AATATCATTG AAGCAATAAG GTCGTAG
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| Protein sequence | MTTDKSIEEI AQEYIPHLKI LEEAGSFAVF LLDRFGRYYY VTEYVTEDIQ ASDKLNIEKL
VYPDDLEVVR RIDKKVWEFL DTLPEEEKLT YKYIYEMRVL DRGKYVRMIY QMRILAFKDD
NFLGMGIIDL APEQSANTSV RFQIKNCLTD EIVPFAIESA TNTLLTPRER EILALAKEGM
FSKEISEKLN ISVHTVNRHR QNILEKLQVG NIIEAIRS
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