| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1128 |
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| Symbol | |
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| ID | 8367550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1340209 |
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| End bp | 1343223 |
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| Gene Length | 3015 bp |
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| Protein Length | 1004 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644983555 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003141243 |
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| Protein GI | 256819964 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.979284 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAT TTATTTTACC AATGTTGCTA TTTTTATGTA CGAGTTTGGC AGTGGCACAA
ACTTATAACA TAAAAGGAAA TGTGAAAGAA GCTCCTAACA GTCCGATGAT GGGGGTTTCG
GTGGTTGTAA AAGGCACTAC CCACGGCGTC TCTACCGATT TCGAAGGGAA TTTTGCCTTA
GACAATGTGA AGAGAGGTCA GGTTCTGGTG TTTTCGTATG TGGGTTACAT CACTCAAGAA
ATCACTGTGA ACAATGGCAA TGCGCTGAAC GTTACCTTGA AAGAAGATAC CCAAACCCTC
GGTGAAGTGG TAGTTATCGG GTATGGAACT CAAAAGGTAA AGGACGTAAC AGGCTCTGTA
TCAGTAGTAG ATGCTAAAAC CATTACCGAA CTAAAGCCTG TGGATGCGGC TACTGCCCTA
CAAGGTACTA CCTCAGGGGT GAGCGTAAAC AAGGCTTCGG GCTCACCTGG AGGGAAGATA
AACATTCTTA TTCGCGGAGT GAGTTCTAAC GGTAGCAACG AGCCTTTGGT AATTATCGAC
GGTTACGAAG GGGCACTGAA CAGTATCAAC CCTGAGGACA TCGAGAGTCT TACTGTATTG
AAAGACGCTC AAGCGGCTAT CTACGGTATT AAAGGCGCGA ATGGGGTAGT ACTGGTAACT
ACTAAGGGTG GACGCAAAAA CACACCTTTG GAAGTGAAAA TTAGCTCTTA TACTGGTATT
CAGCAAACTA CCAAAAAGTT GGATTATATG AACGCTACCG AGTATGCTGC CTTACTCAAC
GAGAGTTATG CTGCCAACGG ACAGGCGTTG CCTTTTGGCA ATTTGGCTTC TTTGGGCAAA
GGCATTGATT GGCAAGACGA GGTGTTTAAG AATTCTGTTA TTTCAGATAT GACAGCTAGT
ATCTCGGGTG GAGGTGAGAA ATTTAGTTAT TACTTAGGGG CATCACATCT TACCCAAGAC
GGTATTGTAG CCCCTGAAAA GTCTAACTTC AAACGCAATA ACGTGAAAGT GAGTTTGGGT
GCTGATATTA CCTCTAAACT CAAAATGAAT TTCACAGCTA ACTATTATAA CAACAAGCGC
AAAACCATTG AGGAAAACGG CTTGGGAGCA GTGCTTTTCA ACGCTTTGAA CTTTTCGCCT
ACCTACGGTT TGCACGATGA AGATTTAACG GGCTTTTTGG GTAATGAGGT AATTAACCCT
TTGGCACAAA TAGACAATAC CTATAATCAG TATGACGGTA ATGGATTGGA GGGGAATTTC
CAGTTGAGCT ATAATCTCAT AGAAGGCTTA GACCTCACTT CGCGTATTGG GTTTAAGACT
TATAGTGATG AGAAGAAAGA TTTTCAACCT CTGAGCTTTT TTGGTACGGG CAAAATCTTC
AACCGCAGTC GCAGTACGGT AACTCAGGAA AAGAACGAAA CGCACGCTTA TACGTGGGAG
ACTTTTGCTA CTTATAACAA AACTTTCTGG AAAAACCACA ACACTTCACT CACTGTGGGA
ACCAGTGCGC AACGCAACTG GGGCAGTGGA CTCAGTGCTA CAGGTTACGA TGTGCCTAAC
AACTCTTGGG ATTTTGCCGA TATAGGTCTC ACTACAGGTA CGAACAACAG CAAAACTGAT
AACTCGTATA TGAACGATTC GCGTCTTACC TCTTTTTTTG GTAGATTGCA ATACGATTTT
AAGAGCAAAT ACTTGCTATC GGCGATGCTT AGGCGTGATG CTTCTTCAGA CTTCCCGAAA
GACAACCGCG CCGACTTGTT TTCATCAGTA ACAGCAGGTT GGAAAGTATC CGACGAAAGC
TTCTTGAAAG AAAGCAAATG GATAGACTTC CTCAAATTGC GTGGTAGCTA TGGTACACTG
GGTAACAATG CCGGTAAAAA CCTCTATAAG GCTATTTTAA ACGGGGAAGC CGTTTACGTG
TTCAACGGAC AAATAGTACG CGGTACGGCG GTGGGCAAAT TGCCTAACCC AAGTGCCAAA
TGGGAAGTAG CTGAAAAGTT AGACGTTGGT TTTGATTTTA ATACCTTGAA GAACCGATTA
TCGTTAGTAT TCGATTACTT TATAGAAAAC CGTAACGATT TGCTCATTTC TAATTTTCCT
GTCTCAGGTA TTATAGGAAC GGCTGCACCA GGAGCATCAA ACCCCACCGT GAACGCTGGT
AATACTCAAA ATAAGGGCTT TGAGGTAGCC TTAGGTTATA GAAGTGATGT AACAAAACCT
TTTTCTTGGG GCTTCAACTA CAATGTTACT CGTTTAGACG GCAAAGTGGT ATCGATTAAT
GGAGATGTGA TTCCAGAAGG AGGGGCTTTC AGCGTTGGTC AGTTAGCACC TGCACGTATG
GAAGTGGGGC AACCTATTGG CTACTTCTAT GGTTTGCAAG CCGATGGAAT CTTCCAAAAC
CAAGCTGAGG TAGATGCACA CCCTTCACAA CTTGCCTTAG GTGCTCCTGC CAGAATAGGA
GATATCCGTT ATAAAGATGT GAATGGCGAT GGAGTAATTG ATTTTAAAGA CCGCACATAT
TTGGGTAAAC CTACCGCTAC TTACTATATG GGATTGAACC TCAATGCTAA GTATAAAAAC
TTTGATTTCT CAACCTATAT GTATGCCGAG CTCGACAAAG AGATGGTGCG CAACTATGAG
CGTTCACAAC CTAACGTAAA CCGTCAGCGT TTATATCTTG ACCGTTGGCG TGGTGAGGGC
ACCAGCAATA GCGTGCCTCG TGTGACCACA GGGGCGACTA CCAATAATTT ATTCTCAAGT
TTCTTTGTAG AAGACGCCTC ATTCTTGCGC GTTCAGAACA TACAGTTGGG CTATTCGATT
CCTGCATCGG TATTAGAGAG TGTGAAGATG AAAACCTTCC GTGTGTACTT TTCGGTAAAC
AACGCCTTTA CTTTCACTAA GTATAAAGGT TATGACCCCT CAGCTACCTC TGGTGATGCC
ATTGGTGGAG GTATTGATTA CGGCTTTTAT CCACAAGCCC GTCAGTTTAT CTTAGGATTT
AATACTTCAT TTTAA
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| Protein sequence | MKVFILPMLL FLCTSLAVAQ TYNIKGNVKE APNSPMMGVS VVVKGTTHGV STDFEGNFAL
DNVKRGQVLV FSYVGYITQE ITVNNGNALN VTLKEDTQTL GEVVVIGYGT QKVKDVTGSV
SVVDAKTITE LKPVDAATAL QGTTSGVSVN KASGSPGGKI NILIRGVSSN GSNEPLVIID
GYEGALNSIN PEDIESLTVL KDAQAAIYGI KGANGVVLVT TKGGRKNTPL EVKISSYTGI
QQTTKKLDYM NATEYAALLN ESYAANGQAL PFGNLASLGK GIDWQDEVFK NSVISDMTAS
ISGGGEKFSY YLGASHLTQD GIVAPEKSNF KRNNVKVSLG ADITSKLKMN FTANYYNNKR
KTIEENGLGA VLFNALNFSP TYGLHDEDLT GFLGNEVINP LAQIDNTYNQ YDGNGLEGNF
QLSYNLIEGL DLTSRIGFKT YSDEKKDFQP LSFFGTGKIF NRSRSTVTQE KNETHAYTWE
TFATYNKTFW KNHNTSLTVG TSAQRNWGSG LSATGYDVPN NSWDFADIGL TTGTNNSKTD
NSYMNDSRLT SFFGRLQYDF KSKYLLSAML RRDASSDFPK DNRADLFSSV TAGWKVSDES
FLKESKWIDF LKLRGSYGTL GNNAGKNLYK AILNGEAVYV FNGQIVRGTA VGKLPNPSAK
WEVAEKLDVG FDFNTLKNRL SLVFDYFIEN RNDLLISNFP VSGIIGTAAP GASNPTVNAG
NTQNKGFEVA LGYRSDVTKP FSWGFNYNVT RLDGKVVSIN GDVIPEGGAF SVGQLAPARM
EVGQPIGYFY GLQADGIFQN QAEVDAHPSQ LALGAPARIG DIRYKDVNGD GVIDFKDRTY
LGKPTATYYM GLNLNAKYKN FDFSTYMYAE LDKEMVRNYE RSQPNVNRQR LYLDRWRGEG
TSNSVPRVTT GATTNNLFSS FFVEDASFLR VQNIQLGYSI PASVLESVKM KTFRVYFSVN
NAFTFTKYKG YDPSATSGDA IGGGIDYGFY PQARQFILGF NTSF
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