| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1127 |
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| Symbol | |
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| ID | 8367549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1336542 |
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| End bp | 1339316 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644983554 |
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| Product | two component regulator propeller domain protein |
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| Protein accession | YP_003141242 |
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| Protein GI | 256819963 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGTGGT TTGTAGGGAC GATACACGCT CAGTTATTGC CACCTATCTA TAACTACGCT
CCTTCGGTAT ACTCGGGTGA GAGTCAGAAT TGGAAAATAT GTCAAGCGAT AAATCAAAAG
ATATATTTTG CTAACAATAT AGGTCTATTG GAGTTCAATG GGGTGGTATG GCAACATTAC
CCCTTGCCCA ATGGGGCGAT AGTGCGCGCC GTAAACGCCA AAGGTAACAC TATCTATACA
GGTGGTTTTG CTGAATTTGG TTATTGGCAA GCAGATGCTT TCAACCGTTT GCAATATACT
TCGCTAAGTA AACGCTTAGC ACCTAAGGAT ATAGAAGACG AAGAGGTATG GAAAATTGTT
TTTTTTGACC ATTGGGTGCT CTTCCAGTCG TTGCACAAAC TTTATATTTA CGACTCTCAG
CACGACCGCT TTCACATTGT ACATTCGCAA AACAACTTAC CTAAAATCTT CAAAGTGGGC
GAGCATATCT TCTTTCAAAA GATGAATGAG GGGCTTTTTG CTCTTGTGAA TGGTAAAGAG
GAGTTGCGTT CGGAGGCATC TCTTTTCCGC GAACATATTG TTATTAATAT CTTCCCATAT
AAAGGTAAGT TTCTATTTGT TACCCAAGAT AAAGGCATTT ACGAAGGAAC ACCTGCTGAG
GTGAAACCTT GGCAAGTGAG TACAGGAGCG CTTACTTCTT CCCTAAACAT TTACAGTTGC
GAACAACTCT CTGACGGTTC TATCTTGCTG GGGACGATTG CCAATGGTGT ATACCGATTA
TCGCCAGAAG GACAACTGTG GGAGCACCTT CATCAGAAAC AAGGCTTGCA AAACAACACG
GTGCTTTCTA TCTTCGAGGA CAAAGAACAC AATGTGTGGT TAGGCTTAGA CAATGGCATT
AGTATGGTGA ATTTCTTTTC GCCTTTCCGC CAGTATAAAG ATAACGAAGG AGTGCTAGGA
GCCGTTTATA CCTCTATTGT TTACCAAGGT GATTTGTATT TGGGTACCAA TCAGGGGCTT
TTTTATGCGT CTTTTCCTTT GAAAGCAGGT CAGCCATTTC AGTTGGTTGA AGGTACTAAA
GGGCAAGTGT GGCAACTGAA AGAACTACAA GGCTCTTTGT TTTGTGGGCA CAATTCAGGT
ACGTTTGTGA TAAACAACCA TCGAGCACAA TTGGTGTGTA ATGTTTTGGG TACTTGGGAT
ATTAAACCTG TGGAAGGACA CCCTAATTGG CTCTTGCAAG GCAATTATGA AGGTTTATAC
CTTTTGGAAC TGAAAGAAGG GCGTTGGCAA TACCGCAATA AGATAACAGG ATTCAATGTA
TCGAGTAGGT TTTTTGAGTT TATTTCGCCT ACTGAACTAT TGGTAAGCCA CGAGTACAAA
GGCGTGTTCC GGTTGCAACT CTCCCCTGAT TTTACGAGAG TACTCCAAGT GCACAAAGAG
ACTTCTGCTC CAATGGGGCG CAAGTCGGCG ATTGCTAAAT ACCGCAATGA GATTTGGTAT
TTTACTGAAA AAGGCTTGTT TAAATATGAT ATTACCGCAC GTAAGTTTGT GCAAGATGAA
AGCCTTACCC ATCGGCTATT CGACCAAGAT GCCTACTTAT CGGGCACTAT GTTACGGGGC
AAAGAGGACG GATTGTGGTT TTTTACCCAA TACAATATAG TGAAGGTGAG TCAGGGTAAG
TTAGACAAGG CACTTCAGCT GAAAAAGATG CCTCTCTCGG CTGCTTTTCG CAAGGATTTG
GTAGGGTTTG AGAACCTCAA TGAGTACCGA GAAGGTGATT GCCTTTTAGG TACTAGTACC
GGCTTTATGG ATTTTGCGTT TAATCCGTCG CACCATACTG CCTACGAGGT GCAAATAGAC
CATATATACA AAAGCAAAGT AGAAGGCGTA TGGCAACCAA TTGCTCTTAA CAGTGCTGAT
AACCGCTGGG CATACAACCA AAACAATCTG CGTTTTAGCT ATAGTGTGCC CGCCTATAAT
GCGATGTTTC AAACTGTATA TCAATATAAA TTGGAAGGAC TTTACGAGCA TTGGAGCGAC
TGGAGCAAGG AGGCAAGTGT GCAGTTTGAT AATCTGCCTG CAGGTGATTA TACCTTTCTG
GTAAGAGCCA GAGTGGGAAA TGCTGTTTCG ACCAATACGG CTATTTTTCA CTTTGTAATA
GAAAAACCTT GGTATGCCAC TAATGTAATG ATAGCTACCT ATATAGGACT CTTACTGCTT
TTGCTTTTTA TAATTCACCG AGTGTATAGA GTTCATTACA AGCGTCATAA GAAGAAGGTA
GAACAAGAAA AAGAGAAAGA ACTCGCCCTA TTGCAATTGG AAAATGACCG CACGGTAATG
AAACTCCAAA ACGATAAGCT CCATAGTGAA GTGGAGAGCA AGAACCGCGA GCTGGCGGTG
ACTACGATGA ACATCGTGCG CAAGAATGAA CTGCTGATGA GCATCAAAGA GGCTCTTTTG
AATAGTGGCA ATAGCAAAGA AGTGTTACAC ATTGTGGAAG ATAACATCAA CAGCGAAGGT
GACTGGGAGC ATTTTCAAGA AATCTTTAAT CAAACTGACC GTGACTTCCT TAATCGGCTT
AAATCGCTTC ACCCTGACCT TACTCCTAAT GACATTAAAC TGTGCATTTA CCTGCGTTTA
AACCTTTCGA GTAAAGAAAT TGCTCCACTA CTGAACATCT CTACCCAAAG TATAGAAATA
AAACGCTACC GCTTGCGCAA AAAGATGCGT TTAGAGCGCA ATCAGAACCT TACTGACTAT
ATTCTAAAGC TCTAA
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| Protein sequence | MGWFVGTIHA QLLPPIYNYA PSVYSGESQN WKICQAINQK IYFANNIGLL EFNGVVWQHY
PLPNGAIVRA VNAKGNTIYT GGFAEFGYWQ ADAFNRLQYT SLSKRLAPKD IEDEEVWKIV
FFDHWVLFQS LHKLYIYDSQ HDRFHIVHSQ NNLPKIFKVG EHIFFQKMNE GLFALVNGKE
ELRSEASLFR EHIVINIFPY KGKFLFVTQD KGIYEGTPAE VKPWQVSTGA LTSSLNIYSC
EQLSDGSILL GTIANGVYRL SPEGQLWEHL HQKQGLQNNT VLSIFEDKEH NVWLGLDNGI
SMVNFFSPFR QYKDNEGVLG AVYTSIVYQG DLYLGTNQGL FYASFPLKAG QPFQLVEGTK
GQVWQLKELQ GSLFCGHNSG TFVINNHRAQ LVCNVLGTWD IKPVEGHPNW LLQGNYEGLY
LLELKEGRWQ YRNKITGFNV SSRFFEFISP TELLVSHEYK GVFRLQLSPD FTRVLQVHKE
TSAPMGRKSA IAKYRNEIWY FTEKGLFKYD ITARKFVQDE SLTHRLFDQD AYLSGTMLRG
KEDGLWFFTQ YNIVKVSQGK LDKALQLKKM PLSAAFRKDL VGFENLNEYR EGDCLLGTST
GFMDFAFNPS HHTAYEVQID HIYKSKVEGV WQPIALNSAD NRWAYNQNNL RFSYSVPAYN
AMFQTVYQYK LEGLYEHWSD WSKEASVQFD NLPAGDYTFL VRARVGNAVS TNTAIFHFVI
EKPWYATNVM IATYIGLLLL LLFIIHRVYR VHYKRHKKKV EQEKEKELAL LQLENDRTVM
KLQNDKLHSE VESKNRELAV TTMNIVRKNE LLMSIKEALL NSGNSKEVLH IVEDNINSEG
DWEHFQEIFN QTDRDFLNRL KSLHPDLTPN DIKLCIYLRL NLSSKEIAPL LNISTQSIEI
KRYRLRKKMR LERNQNLTDY ILKL
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