| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1121 |
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| Symbol | |
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| ID | 8367543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1327897 |
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| End bp | 1330908 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644983549 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003141237 |
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| Protein GI | 256819958 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATAA AGAAAATATT GTTTTTCTTC CTGATGTTTT CTCTAACCGT TACCCTGCAC
GCTCAGCAAA TTACCGTACA AGGTACCGTT TATGAAGAAG GGACTAAAAA CCCCATTCCA
GGAGCAAACG TAATTGTAAA GGGTACTACC CAGGGTACTT CTACCGACTT CGAAGGGCAC
TATACACTTC CCAATGTGCC CTCCAATGCC GTCTTAGAAG TCAGCTTCGT AGGTATGCAG
ACCCAAAATG TAAAAGTAGC AGGACGCTCC CGCATTAATG TTACTTTAAG AGAAAATACT
CAAGAGCTCA AAGAAGTAGT AGTGATTGGG TATGGAGCCG CTCAGAAACG AGACCTTACA
GGCTCTATTG TCAGTCTTAA AACCGATGAA TTTGCTGACC GTCCGTCTAC CAACCCCTTA
GCCTCTATCC AAGGGAAGGT AGCTGGGGTG CAAATCGTTA ATACAGGGCG TGCAGGGCAA
GACCCCGAAA TCCGTATTCG CGGTACAAAC TCTATCAACG GTTATACACC TCTGTATGTA
GTCGATGGGC TCTTTACCGA TAATATCAAC TACCTCAACC CGCAGGATAT CGAGTCTATG
GAAATCCTCA AAGACCCCTC GTCTCTCGCA ATCTTCGGGG TTCGTGGTGC CAATGGGGTG
ATTATCATCA CAACCAAAAA AGCCAAAAAA GGACAAACAG TCGTAAATAT CAATTCTTCC
GTAGGATTAA AAGTCATCAA CGACCGTGTT GCAATGACTG ATGCCGAAGG CTTTAAAACT
CTTTATGACG AAGAGTTAGC CAATAAAGGC GCCAATCCGT TTGATTATAC CCATTGGCAA
GCTAATACCG ATTGGCAAGA TGAAATCTTC CGCCGTGCGT GGGTGTCCAA TCATAACGTG
AGCGTAGCTA GTTCAGGCGA GAAAGGGCGC TTTTATATGG GGGCAGGCTA TACCGATGAA
GAAGGCTCTA TCAAGCACGA AAAACTCTCC AAACTCACTC TCAACCTCAG TAGCGATTAC
AACGTAACCG ACTTTCTGCG CTTTGGTTTC CAAGCCAACG GATCACGTAT CCTACCTGCC
GACGGACGCG GTGTAGAAGC AGCACTCAAA GCGGTTCCTA TTGCCCCCGT GAAAGATGAA
AATACAGGTT TGTTTTACGA TATGCCTAAC TTCCAAAATG CACAGGTATA CAATCCTATG
ATACGTATAG AAGAACAAGC TAATAATGCT AAAGCTTCTA TTCACCGTTT AACAGGGAAC
ATCTATGGAG AATTGAAGTT CTTGAAAGAC TTTACTTTTA AAGCTACTTT CTCCGCCGAT
TATAACGTCC ACGAAGAACG CAAATTCGAC CCTCTTACCT ATGTGTATAG TCCTTTAACT
CGCGATAAAA AACACATAGG AGGACAGTAT GAAACTCTTT CACAATCTAA GGCAACCACT
TTGCGCACTC AGCAAGATTA CATACTTTCA TTTAAAAAGC AATGGGGGAA ACACAACCTC
AATGCAATGA CAGGGCTCAC TACTGATTAT AAAGAATATT CTAAGTTAAA TGGAGCGCGT
AGTCAGCATA TGGACGATAT TATCTTTTCT CCTAACGGCA ATACCGATAA ATGGTGGCTT
TCTTCTTTTG GAGCTAAGAA TTCTTCCAAT GGTTCTTCAC AAAACAGACG CTTTACGATG
TCTTACCTTC TTAGAACTCT TTATAATTAC GACAATCGTT ATTTGCTCAA CGCTTCTTAT
CGCCGTGATG GAGCTTCAGT ATTTCATCGC TTGGGTAATA CGTGGGACAA CTTCTACTCC
TTTGGCGCAG GTTGGGTACT CAGTGAAGAA GCCTTTATGA AAAACCAAAA AGTAGTAGAT
TACCTCAAAC TAAAAGGTTC TTGGGGTGTG CTAGGTAACC AAAACACAGG CAATGACTAT
CCTCTTTACC CTAGATTAGT AAGTTCAAGT AGTGCTGTTT TTGGCGACCG TATTATTACA
GGCTATGTAC CTGCCTATTT AGTACAAAAC TTAGGTTGGG AAAAGACCTA TGCGTGGGAA
GCCGGTGCCG AGTTCCGTTT CTTGGGCAAT CGCCTCAGTG TAGAGCCTGT TTACTATCAC
AAGAAAACCA AAGACCTTAT TGTAAATCTG CCTAGCCTTG CAGGTACACA AAACTCTTTG
GAGAACCTCG GAGAGATAGA GAATAAAGGT TGGGAAATTT CAGCCTCTTG GCAAGACCAA
CTCAAAGAAA GCGGATTTAG TTATGGTGTA AGTGCCAATA TTACCACTAT TGATAACAAA
GTGCTTTCAT TAGGTCGTAA TGCTGAGTAT GCTGTTTATA GTGGTCCAAA CGACGTAGCG
CGTAGCTTGG AAGGTTATCC TATTGGTCAT TTTTACGGCT ACAGAGTGAT TGGTGTATAT
CAAAATTATC AGGACATTGC CAATTCTCCA GTAAATTCTT TTGGAGCTAA ACCTGGTGAC
CTTAAATTTG CCGACCTCAA CGGTGATGGT GTGATAGACA CTAAAGACCG TGAGATGATA
GGTAATCCTA CCCCAGATCT TACCTATGGT TTTAGTCTCA ATCTCGGCTA CAAAGGCTTT
GACCTTTCAG CAGAGTTTAT GGGAGCTTAT GGCAACGAAA TCTATCGCGG TTGGGGCGAA
AGTGGTTATG CGACCCTTAA CTACCAAGCA CACCGCTTGA ACCGTTGGCA CGGCGAAGGC
ACTTCCAATT GGGAACCTAT TGTAGATAAC AGTCGCCCCA TCAATCGTAT GAACTCTTCA
TACTATATAG AAGATGGTAG CTTTTTCCGC TTGCGCAACG TGCAGTTAGG CTATAGCTTG
CCACAAGACG TATTACAACG TTTCAAAGTA CAGAAATTGC GCTTCTATGC TAATATGCAA
AACCTAAAAA CTTGGCATAA AAACACAGGC TATGTTCCCG AAATAGGAGG TAGTGCCTTA
TCTTTTGGTA TTGATACGGG TACTTACCCT ATGCCAATGA TTATTACTTA CGGTGTAAAT
ATCACTTTTT AA
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| Protein sequence | MEIKKILFFF LMFSLTVTLH AQQITVQGTV YEEGTKNPIP GANVIVKGTT QGTSTDFEGH
YTLPNVPSNA VLEVSFVGMQ TQNVKVAGRS RINVTLRENT QELKEVVVIG YGAAQKRDLT
GSIVSLKTDE FADRPSTNPL ASIQGKVAGV QIVNTGRAGQ DPEIRIRGTN SINGYTPLYV
VDGLFTDNIN YLNPQDIESM EILKDPSSLA IFGVRGANGV IIITTKKAKK GQTVVNINSS
VGLKVINDRV AMTDAEGFKT LYDEELANKG ANPFDYTHWQ ANTDWQDEIF RRAWVSNHNV
SVASSGEKGR FYMGAGYTDE EGSIKHEKLS KLTLNLSSDY NVTDFLRFGF QANGSRILPA
DGRGVEAALK AVPIAPVKDE NTGLFYDMPN FQNAQVYNPM IRIEEQANNA KASIHRLTGN
IYGELKFLKD FTFKATFSAD YNVHEERKFD PLTYVYSPLT RDKKHIGGQY ETLSQSKATT
LRTQQDYILS FKKQWGKHNL NAMTGLTTDY KEYSKLNGAR SQHMDDIIFS PNGNTDKWWL
SSFGAKNSSN GSSQNRRFTM SYLLRTLYNY DNRYLLNASY RRDGASVFHR LGNTWDNFYS
FGAGWVLSEE AFMKNQKVVD YLKLKGSWGV LGNQNTGNDY PLYPRLVSSS SAVFGDRIIT
GYVPAYLVQN LGWEKTYAWE AGAEFRFLGN RLSVEPVYYH KKTKDLIVNL PSLAGTQNSL
ENLGEIENKG WEISASWQDQ LKESGFSYGV SANITTIDNK VLSLGRNAEY AVYSGPNDVA
RSLEGYPIGH FYGYRVIGVY QNYQDIANSP VNSFGAKPGD LKFADLNGDG VIDTKDREMI
GNPTPDLTYG FSLNLGYKGF DLSAEFMGAY GNEIYRGWGE SGYATLNYQA HRLNRWHGEG
TSNWEPIVDN SRPINRMNSS YYIEDGSFFR LRNVQLGYSL PQDVLQRFKV QKLRFYANMQ
NLKTWHKNTG YVPEIGGSAL SFGIDTGTYP MPMIITYGVN ITF
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