| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1104 |
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| Symbol | |
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| ID | 8367526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1305756 |
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| End bp | 1307045 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 644983532 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003141220 |
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| Protein GI | 256819941 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTT TTAAAAATAT AAAAGGGGTT ATCAAGAATA ATAAAAAGAT TGTAGAGAAT
TATTTTTTTA TGACATTGCT ACAATTTTTA AATACATTGT TTTATTTACT TATTTATCCT
TATTTGATAA GAATTTTAGG AGGAGAAGGA TATGGTTTAT ACGTTTTTGC ATCTTCTATA
GCTGCTTATT TTATATTCTT TATCAATTTT GGATTTGATT TACCAGCTAC TAAGTTGATT
GCAGAAAATG TAAATAATAA AAAAATACTT GAACGAGTAT TATCAGAGGT TTTTACAGCT
AAAAACTACT TATTTTTGAT TTCTATAATA GTTTTTGCTA TATTATTATT TAGTATTCCT
TTGTTTTGGG ACAATAAATG GATATTTATA AGCTGTTTTA GCACTGTATA TTCATATATT
TTATTTCCAC AATGGTTTTT TCAAGGGATA CAACAAATGC GAGTGCAAAC AATGTTGCAA
TTGGCAGTAA AAATATTGAG TTTACCTTTT ATATTTGTTT TCGTAAAAGA AAAAGAAGAT
TTAATGCTAT ATTCATTTAT TGTAGCAGGA ACTACTTTTT TAGCAGGCAT TATTTCTTTT
GTTATTATAC ATATTAAATA TCAATTGTAT GTGAGCTGGA TAGCTTTGAA AGAACTGAAA
GAGGTTTTTA AAAAATCACT ACCTTTCTTT TACAGTTATT TGGCAGGCTC TTTAAAGGAG
TACAGTATCC CCGTGATTAT AGGAGCTTTA TTTGGAATGA AAGAAGTAGC AATATATGAT
TTAGCCAATA AGATTATTTA TATTCCTCGC GTAATATTTA TGAGCATTAA TGCAGCTATT
TTTCCAAAAA TAGTAGTACA TAATAATGCA AATGCTATAA AGAAAATCAT ACGATGGGAA
TATATATTAT CGATGATTAC AATGCTAGGG ATAGCTTTGT TAGGAGGCTA TGCCGTACAT
TTATTAGGAG GAGATAGTAT GGCTGAAGCT CATTATATGA CAATATTGTT AAGTAGTACT
ATTTTGAGCA GACTAATAGT GGGCGCCTAT ACTTATTTTG TGTTTATCCC TAATGAGAAA
AATTTTTTGG TTACCAAAAC ACAGCTTATA GCTTTGGTTA GTTTTGTGAT AAGTGCTTTT
GTTTTGTTAT TTAATAGAAG TATTTTTACA ATAGGGATAA TGATAACTAT TTCGGCACTA
TCTGAGATTA TATATTGTTT ATATGCGACA TCAAAGTATA AATTACTTTT AAATACTACG
GAAGATGAAA ATAGCACTTT TAGGAAGTAA
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| Protein sequence | MSFFKNIKGV IKNNKKIVEN YFFMTLLQFL NTLFYLLIYP YLIRILGGEG YGLYVFASSI
AAYFIFFINF GFDLPATKLI AENVNNKKIL ERVLSEVFTA KNYLFLISII VFAILLFSIP
LFWDNKWIFI SCFSTVYSYI LFPQWFFQGI QQMRVQTMLQ LAVKILSLPF IFVFVKEKED
LMLYSFIVAG TTFLAGIISF VIIHIKYQLY VSWIALKELK EVFKKSLPFF YSYLAGSLKE
YSIPVIIGAL FGMKEVAIYD LANKIIYIPR VIFMSINAAI FPKIVVHNNA NAIKKIIRWE
YILSMITMLG IALLGGYAVH LLGGDSMAEA HYMTILLSST ILSRLIVGAY TYFVFIPNEK
NFLVTKTQLI ALVSFVISAF VLLFNRSIFT IGIMITISAL SEIIYCLYAT SKYKLLLNTT
EDENSTFRK
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