Gene Coch_1073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1073 
Symbol 
ID8367495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1270553 
End bp1272046 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content41% 
IMG OID644983501 
Producthypothetical protein 
Protein accessionYP_003141189 
Protein GI256819910 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAC CGATGAAAAA TATACTATAT ACCACCACAA GAATAGTAGC CATAGGATTA 
CTATTCGCTT CTTGTGATAA ATTCTTAGAC GAAGTCCCTG ATACTCGTAC CGAAATCGAT
ACTCCCGAAA AAGTACAAGA ACTCTTGGTA AGTGCCTATC CTGATGCTTT GTATATGGAT
ATTGCCGAAA CAATGAGTGA TAATGCAGGT GATAAAATAA GTCTTACCGA AACTTCTATC
TTAAACACAG AACTCTATCA GTGGAAAGAT AGCAAAGAAA CCCGACAAGA TGCTCCTACT
TTCTATTGGG GGGCAGCTTG GGGTGCCATA GCCTCTGCTA ACCACGCCTT AGAAGCCGTA
GAAAAACTAG GTGGAGGTTC CTCTCTTAAT TACCTCAAAG GAGAAGCACT CGTAGCACGA
GCTTACGCCC ATTTTATGTT GGGGCTGTTG TGGTGTAAGC CCTACAACCC TGCTACCGCC
TCTTCCGATT TAGGATTACC TTATGTAACC GCTGCCGAGA AAGTAGTATT TGCTAAATAC
ACACGCTTGT CGGTAGAAGA ATACTATAAG GCTATCGAAA AAGACCTCGA AGAGGGCTTA
CCTCTTATCG ATAATACCTC GTATAGCAAG CCCAAATTCC ACTTTACCAA AGAAGCTGCT
CATATTTTTG CTACTCGTTT CTACTTAGTA AAAGGAGAAT GGGCTAAAGT TATTGCACAC
GCCAATGAAG CTCTTGGTAG TAATCCTGCT GCCAAAGTAC GCGATATAAA CAAGATAAAC
ACCCTTACTA CTTTACAACG TCAAGCGCAA TACAGTAGTA CCAGTGAGCC TTCCAACGCT
TTGATTACAG GAGCCTCTTC TGTATATCAA AGAAACCTTA GTCGTAATAA ATACGGGATG
ACGGCTACTT TATCTGTCTA TTTGTCGCAA AGAAGCTTAC ACCCACTTGA TATGCCTTGG
GCATATGATT TCCAAGGAGG TAATGAGAAT ATACAGAATA TTCCTAAATA TCAAGAATAT
TTTAAAGTAA ACAACGTCTC AGCAGGTACA GGTTACCCCT ACGGAATGGC TACCCTCTTG
CTTTATGACG AAGCCCTGCT TAACCGTATG GAAGCCTATG TAATGACAGG ACAAACAGCT
AAGTTTATCG AAGACCTAAA AGTGTATTTA CCTTTTAAAA CAGGAGAAAC GCTCGATGTA
AATAACATTA CCGAAACAGC TCTTAATACC AAATACAACG GAAAAGGTAC TGAGCTCTCC
CCTGCTTATA CACTTAACAC CCCTCAGCGC CAAATGTTGC AATGTCTGCT CGATTTGCGC
CGTATAGAAT TTGTTTTCGA AGGATTGCGC TGGTTCGATA TTAAACGTTT TGGTTTAAAA
GTAATTCACC AAAAGGGGAA CCAAACCTTA GAACTCAACA AAGGCGATTT GCGTCGTGAG
TTGCAAATAC CCGAAGACGC CTTGGCTGCA GGTATTACTC CTAATCCAAG ATAA
 
Protein sequence
MNTPMKNILY TTTRIVAIGL LFASCDKFLD EVPDTRTEID TPEKVQELLV SAYPDALYMD 
IAETMSDNAG DKISLTETSI LNTELYQWKD SKETRQDAPT FYWGAAWGAI ASANHALEAV
EKLGGGSSLN YLKGEALVAR AYAHFMLGLL WCKPYNPATA SSDLGLPYVT AAEKVVFAKY
TRLSVEEYYK AIEKDLEEGL PLIDNTSYSK PKFHFTKEAA HIFATRFYLV KGEWAKVIAH
ANEALGSNPA AKVRDINKIN TLTTLQRQAQ YSSTSEPSNA LITGASSVYQ RNLSRNKYGM
TATLSVYLSQ RSLHPLDMPW AYDFQGGNEN IQNIPKYQEY FKVNNVSAGT GYPYGMATLL
LYDEALLNRM EAYVMTGQTA KFIEDLKVYL PFKTGETLDV NNITETALNT KYNGKGTELS
PAYTLNTPQR QMLQCLLDLR RIEFVFEGLR WFDIKRFGLK VIHQKGNQTL ELNKGDLRRE
LQIPEDALAA GITPNPR