| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1046 |
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| Symbol | |
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| ID | 8367468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1241741 |
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| End bp | 1244584 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644983474 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003141162 |
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| Protein GI | 256819883 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCACT TCATCATCTT ACTTATCATT CTTTTGGGGC ATTTCCCCAC CACAACAGCT
CAAAATCAGG ACTTGCCCTT TGTCCCACCT ATCTATAACT ACTCTCAAAC TCAATACAAG
GCAGGCTTGC AAAATTGGCA AATAAGCCAA TGTAAAACGG GCGTCCTCTA CGTGGCTAAT
AACCAAGGGC TACTTACTTT CGACGGACAG GTATGGCAAC TCCACTACCT GCCCCAGAAA
AAAATAGCCC GTTCTGTTCT TGCCGATAAT AACGATCCTA AACTGCGCGT CTATGTAGGC
TCTTTCGAAG AGTTTGGCTA CTTCCAGCGC AATGCTCAAA ACCAATTGGT CTACACTTCT
CTAAAAGACC AACTCAAAGA TTACCGCTTT CACAACGATG AAGTCTGGCG CATATTCAAG
CATCAAGATA AGATTTACTT CCAAACTTTC TCCTCCTATT TTGTGTTCGA CGGCAAGCAA
GTACGCGCTT TCAGTCCTAA ACCTGCCCCT TTTGCAATGT TCTCCGACGG CAATACCCTC
TATATGCAAG GCGTAAATGC CGACTTTTAT ACCATCGACC CTCAACATCG CCTCCACCAA
AAACTCTCTA CTAACAGCTT AGGAGGATTG GTAATCGCTA CTATCCCCTA TCAAAAAGAA
CTCCTTCTGG TAACCGACAA GAACGGCTTG TTCTTTTTCA ACCCTCAAAC CGACCAGTTG
CGCAAGTTCA CTACCGATAT CGACGCTCTA TTACCCTCCA TTAGGCTGAA CCGTGCGCTC
ATTACCGATG AAGGTAACCT CATCTTAGGA AGCCTTTCCG AAGGTCTGTA TGCTATCAAT
GTCAGCACAG GTAAACTCCT GTGGCATATC CACAAGAAAA ACGGACTGAA CAATAACACC
GTACTCGGGC TTTATGAAGA TATCCAGCAC AACCTCTGGG TAGCCTTAGA CAACGGTATT
GCTATGATTG AAATCCCTAG CAAACTCCGC TTCTTAAATT TAAATGGCGA TGTAGAACTT
ATCAGCGATA TGGCTGAGCA AAGCAACTCT TATTACTTAG CCTCTAATAA AGGAGTCTTT
TCCCTTACTA ACGGAAAACT CAACAAACTG CCCAACTTCT CAAGCCAAGT GTGGTTCGTA
AAGCAGTTCG ACCACCAGTT ATTTGTAGGA CATAACAAAG GAGTCTCCGA ACTCGTAGGT
GACCAATTAC GTCCCCTCAG CAATGTAGGC GTCGGAGGTA TGGATTTAAA GAAGGGAACG
ATTCACGGTC AGGAGGTGCT CGTCGGCTCT TCGTATTCTG TACTTACTAT TTACAAGAGA
GACAAAGCTG GCAGGTGGGA GCCCTCACAT ATCGTCGATG GCTTCTTCGA CCTTACTTAT
CGTATCGAAA TAGACCCTAT GGGCAACATC TGGACAAATC ACATCTATAA AGGCGTCTGC
AAACTTTCAC TTACCGAAGA CCTAAAAAAG GTGAAACACA AAGTAGTGTT CAGTAAACCT
AAAACCAAAG AAGCCCTCCG CCTCCTCAAA ATACGCGGAA AAGTAGTCTT TGCCGACGGC
TCTCAATTCT ACTACTATAA CGAAGATAAA GAAGAAATTG TACCTTATAC TATCCTCAAT
GAACAACTCC CTCAGCTCAC CAAAACTCGC AATATAGTAC CCGTAAACGA TAATCGGTTC
TGGTTTATCA CTGCCACCGA TTACTTTTTA GTTTCCTTTG CCGATGGTCA ATACAAAATA
ACCGAAAAGA TTGCCTTCGA TGAGCTCCAA CACCCCACCA CCGAAGACCG CGCCTCAGTA
TTCGTGTCCT CCGATGGTGC TTCTTTCTTT TGTTTAGACG GTAGTATCGC CCGTTATACT
GATAATGCCC CTCAAACCAC CTACCCCTAT AATCTCAGCC TAAAAAGCCT CCGCTCCTAC
GAACGCGATA CCGACCAATA TCTTTTGGAA GAAATTACCG CCAACCCTTC TTTCCCTTAC
GCCAAAAACA ATTTGGTGTT CCAATTTCAG TATCCCAATT TTAGTAAAGA ACACTACCAA
CTATGGTACG TCTTAGAAGG ATATGACAAG CGGTGGACGC AAGCCGACCC CGATTTTAGC
ATCAGCTATC AAAATCTCCC CCCTGGTAAA TACAGGCTCA AGGTAAAAGT GCTCAACGAA
CTAAACAAAG AGCTCTCCCT CTATTCCCTC CCGTTTCAAA TCACTACCCC TTGGTATAAA
AGCCTTTGGG CTTATATATT GTATTTCGTC AGCTTCATCG GGGTAAGTAT TGTAGCAACA
GCTATCTACT TCCGTTATAA AATGAAGAAA AAAGAGCGTT CCTTCTTGCG TGAAAGAATA
CGTCGCCAAC GCCTGCTCGA GTCACGCGAA CAAGAAGTAA CTAAACTCCA AAACCAAATG
CTTGCCAACC AGTTAGAGTA CAAGAGTAAG GCTCTTGCCG AAGCCACTAT GCTAAACATC
AGGCGCGACG AGTTCCTTAC CAACCTCATA GTAGAGCTGG AACAACTAAT GGACAACCAG
AAAGTAAGTA AAGCCAAAAG TCATCTCATT TTGCAACATA TCCGCGAGAA TATCTCAGAA
GAAGACCAAT GGGCAGTATT CCAAGAAAAC TTCGATATGA TTCACAAGAA CTTCTTCAAG
AATCTCAAAG AGCGTTTCCC TTCACTCACC ACCACCGATT TGCGTATTTG CGTACTGATA
AGGCTTAATT ACACAACCAA AGAAATCGCC ACTATGCAAG GCGTATCCAT TCGTGGAGTT
GAAACTGCCC GTTACCGTAT CCGCAAAAAA CTCAACCTTT CCGAAACCGA TAACCTATAC
GACTTTTTTG TAAAATTCCA GTAA
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| Protein sequence | MKHFIILLII LLGHFPTTTA QNQDLPFVPP IYNYSQTQYK AGLQNWQISQ CKTGVLYVAN
NQGLLTFDGQ VWQLHYLPQK KIARSVLADN NDPKLRVYVG SFEEFGYFQR NAQNQLVYTS
LKDQLKDYRF HNDEVWRIFK HQDKIYFQTF SSYFVFDGKQ VRAFSPKPAP FAMFSDGNTL
YMQGVNADFY TIDPQHRLHQ KLSTNSLGGL VIATIPYQKE LLLVTDKNGL FFFNPQTDQL
RKFTTDIDAL LPSIRLNRAL ITDEGNLILG SLSEGLYAIN VSTGKLLWHI HKKNGLNNNT
VLGLYEDIQH NLWVALDNGI AMIEIPSKLR FLNLNGDVEL ISDMAEQSNS YYLASNKGVF
SLTNGKLNKL PNFSSQVWFV KQFDHQLFVG HNKGVSELVG DQLRPLSNVG VGGMDLKKGT
IHGQEVLVGS SYSVLTIYKR DKAGRWEPSH IVDGFFDLTY RIEIDPMGNI WTNHIYKGVC
KLSLTEDLKK VKHKVVFSKP KTKEALRLLK IRGKVVFADG SQFYYYNEDK EEIVPYTILN
EQLPQLTKTR NIVPVNDNRF WFITATDYFL VSFADGQYKI TEKIAFDELQ HPTTEDRASV
FVSSDGASFF CLDGSIARYT DNAPQTTYPY NLSLKSLRSY ERDTDQYLLE EITANPSFPY
AKNNLVFQFQ YPNFSKEHYQ LWYVLEGYDK RWTQADPDFS ISYQNLPPGK YRLKVKVLNE
LNKELSLYSL PFQITTPWYK SLWAYILYFV SFIGVSIVAT AIYFRYKMKK KERSFLRERI
RRQRLLESRE QEVTKLQNQM LANQLEYKSK ALAEATMLNI RRDEFLTNLI VELEQLMDNQ
KVSKAKSHLI LQHIRENISE EDQWAVFQEN FDMIHKNFFK NLKERFPSLT TTDLRICVLI
RLNYTTKEIA TMQGVSIRGV ETARYRIRKK LNLSETDNLY DFFVKFQ
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