Gene Coch_1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1024 
Symbol 
ID8367444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp1210651 
End bp1211217 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content44% 
IMG OID644983450 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_003141140 
Protein GI256819861 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.421531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT ATTTAATCGC CTGCCTCGGC AATATAGGGG CTGAATACGC CAACACTCGT 
CATAATATAG GATTCCTTGT AGCCGATACA TTGGTGAAAG ACCATAATGC TTCTTTTACT 
ACTCAGAAGC TTGGTGACCT CGCCGAAATT AAAGTGAAAG GGCGTACCTT TATATTGTTG 
AAACCCTCCA CGTATATGAA CCTCAGTGGC AAAGCAGTAC GCTACTGGAT GGAAAAAGAA 
AACATTCCTT TGGAAAACCT CTTGGTCATT TGCGATGACC TAAATATCCC GTTTGGCACT 
ATCCGTATCA AAGGCAAAGG TAGCGACGGG GGTCACAACG GACTTAAAGA TATACAAGCC 
CAACTGAACA CCCAACAATA TGCGCGTTTG CGCTTTGGTA TTAGCAGTAA TTTTGAATCA 
GGCAGGCAAA TAGACTATGT ACTCGGCGAG TGGGCTCCCG AAGAGCAAAC CCTCTTGCCT 
GAACGCCTAC AGAAATCTGC CGAAGCCGTC CTTTCTTTTG GCTTAGCAGG GCTTAATATT 
ACAATGAACA CCTTTAATAA CAAGTAA
 
Protein sequence
MKKYLIACLG NIGAEYANTR HNIGFLVADT LVKDHNASFT TQKLGDLAEI KVKGRTFILL 
KPSTYMNLSG KAVRYWMEKE NIPLENLLVI CDDLNIPFGT IRIKGKGSDG GHNGLKDIQA 
QLNTQQYARL RFGISSNFES GRQIDYVLGE WAPEEQTLLP ERLQKSAEAV LSFGLAGLNI 
TMNTFNNK