Gene Coch_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1001 
Symbol 
ID8367421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1173017 
End bp1173535 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content42% 
IMG OID644983427 
Productheat shock protein DnaJ domain protein 
Protein accessionYP_003141117 
Protein GI256819838 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGG ATTACTACGA AATATTAGGA GTTAGCCAAA AGGCTTCTGA CGACCAAATA 
CGCGATGCCT ACAAAAAGCT CGCAAAAGCC TATCACCCCG ATAAACATCA GGGCGACGAT
TTCTTTGCCG AAAAATTCAA AAGCCTACAA GAAGCTTACG CAGTCCTTTC CGACCCCGAA
AGTCGTAAAG ACTACGACAC CGACCTCGCC GCCGAGTTAA AAGGGCAAAA GAAAACCGAA
GAACCCAAAA AGCAAGCTAA AAAGAAACCC TCACAAAAAA ATAGCAATAG CACCTCCTCA
AAAGCTCGTA CCGTAAAGGA TTTGCCCTCT TTGATAGATA TTTATTTCGA ACAGAAAATC
GCTACCGTAA AAACCCGTAA AGAGTACGAT ACTATCTTAG CTTCTCCCCA AAAAAAGTAC
TCCTCTTGGG TGAAAATTGT GCTTGTAGTA CTTGTCATCA TTCTAAGCAC CATCTTGCTA
AACCCTTCTT TCGGTCTCCT AAAAGAACTT TTGCCTTAA
 
Protein sequence
MLKDYYEILG VSQKASDDQI RDAYKKLAKA YHPDKHQGDD FFAEKFKSLQ EAYAVLSDPE 
SRKDYDTDLA AELKGQKKTE EPKKQAKKKP SQKNSNSTSS KARTVKDLPS LIDIYFEQKI
ATVKTRKEYD TILASPQKKY SSWVKIVLVV LVIILSTILL NPSFGLLKEL LP