| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0996 |
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| Symbol | |
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| ID | 8367416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1166562 |
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| End bp | 1170500 |
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| Gene Length | 3939 bp |
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| Protein Length | 1312 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644983422 |
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| Product | Superfamily I DNA and RNA helicase and helicase subunits-like protein |
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| Protein accession | YP_003141112 |
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| Protein GI | 256819833 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCAAG AAGTATTTAC TGCTCTGCAA AACAAACTGA AAGTGGGTAA CCGTCGTGGC
GTGCACCTCA ATGCACTTCC TGGTGCTTCA CGCTATAAGT TTGATATCGC ACGTCTCTCG
GCTATCTTCA AGAGCTTGCC CGAACGCTTT ATTCTCGACT TACTCACCTT ACGCAACCTC
AACTTTTCGT TTTCTATTCA CGATACCGAA AGTACTAATA TTGATCATAG AGGAGCTGGC
TCGCGAACTC CCGAAGAGGG ACAAGCCGTA AAAGTGAATG AAAAAGAAGA AGGAAAATCA
GTAAAAGAAA AGGGTACAAG GGAAGTAGCG CTGGAAAAAC TCGTAGATAG TATCGAAAAC
CTGATGTTCC AAAGCGAGGT TATCACTTCG GAAAAAGGGG TGAACACACT CGGCTTTGGC
TTCCCCATAC TGTTGCGTCG GGATATGGGC GACGGACAAC TAACAGCTGC GCCTATCCTG
ATTTGGTCGG TAAAGATAAA GCCAGCTACC CAAATGAATA CGTGGGTAAT AAGTCGTAGC
GAGGAAGACC CTATCTACCT AAACGAGGTG CTCACCAACC ACCTGCAAAA CGATTCGGGC
GTAAGCCTTA AGCCTATCCC CGACGAGATG CTGGAAGACG GAAAAATCGA TAAACCTGAA
CTGCACTCTC TTTGCTCGGA TATCCTCAAC CAACTGAAAG TTACCCAAAA CTTGGATTTC
CTGCTGAACA ACTATACCGA GATTCTCCCT CTAAAAACCA AAGCGGCATA CGAGGAACTT
TTATCTAACA AGGGCGATGC TTTTATAGAA AAAAGCGGTA TTCTCTCCCT CTTTGAAGTG
CAAAAACAGA ACATCATCAA CGATTACGAA TCGCTGAAAA AGGAATTTAT ACCTTTGCAA
GCAACAGCCA ACGAACAATT CCAATCGCTG AGCGCTATTG AAACCGACCC CTCTCAACAG
TCGATTTTGG AATCGCTGAA AAGTCAGCAG AAAATACTTA TTCAAGGTCC CCCAGGTACG
GGCAAGAGCC AAACGCTCAC GGCGATTCTC ATCAATGCTT TGGAAAACAA ACAGAAAACA
CTAGTAGTAT GCGAGAAGCA AACTGCCCTC GAAGTGCTCT ACAACGCCTT GCAAAACAAA
GGTTTGGGCA GGTATTGTAC AATGATAAAA GATGCCATTG CCGACCGCAG ATTCATTGTC
GATGCCGTGC GTAACCATAT CGATAATGCC GAGTTTAAAA AAGAAACACC AGCTTTCCTC
GAAAATCTCC TTACCGAACA AGTGCAGGCA ATGCGCAAAA TTACAACAGA TATCAATGCT
ATTCACCACA AACTCAACCA ACCGCTCCTC AACCAACTGT CGTGGACAGA TGTAATGGCG
GAACTAATGC ATTATGAAAC TGATAGAGAA GAACTCAACC TCTCGGCTTT TTCCTTTCAA
TTTACTGATG AAGAATTTGC CTCTCTCGCC CCCCTTTGGC AACAAGGTGA GGCGCTCTAT
CAGCGCTATG CGCCTTACGC TCAAAATCAT TTGTTCAACC CCAAAAAACT CACCGCTACC
AATCTGTTTA ACACCCAGCA ACAACTCGCC GAAGCCTTCA AGCAATACGC ACAACAGTGG
GAGGTTATCC AGCAACAAAT AGCCGTTTAT AAAGCCTATT ACTTGCACAA ACGCAAAGAA
GAATTTATAC AACAGCTGGA CACCTTAGCG CAATATCGCA ATGAGTATGA GCTGATTACC
GCTACCCTCC CCCCTACTTC ACCTGTGTAT CAACCTGAGG TCACCAAAGG ATTTTTCTAC
AAGCTCTCAG CACTCTTTTC TGCCGAGAAA AAGCAGGTGC TGAAAACCCA AAAACGCTTA
CAAGAACTCT GTACTGCGAT TAAAGCACTC AGTTTGCACC GCAATTTTTT GTCGATTGCT
ATTTCGGATA ACTTATTGCT CAACAAAACT GTTATCGCCG AGTACACTCC TGCTATTACC
CAAGCGCAAA CCGATTTCGA CAGCAAAGTC AATGCTGATT TTGTTGCCTT AGACCTGCTG
AATTACTACG AACGCTCGTT TGTAAACGCC GATTTAGACA AGCTCATAAG CGAAGTAAAA
TCGCTTAAAA ACCGTATAGA AGCTGATAAT TGGCTGGACA CTCTCAATTT TGGCAATACC
TTTGCCGAGT TTGAAGCCTT TATCACCCGC AGTTTAGCGA CCTACAACAA CTATCAAGCC
GACCCTGCAC AGCCTTTGGT GGCTCAGTAC GAGTGGTTTG CATTCTTCCA ATCGCTCAAC
GATTTCCAAG AGCGCATCGT TTTATCACTC ACCAAAGTAA CGCATTGGGA AGCCTCTTTC
CTCTACGCCT ATTACACCTT GCTCTTGCAA CGAAATGCCG ATGACACGCT AAACTTCAAC
GAGCGCGATT ACGCCGATTT TAAAAAGAAA ATACACTACT TCGCCTCTGC CCAAAAAGAT
TTTATCGAGG GCTACTGGAA TACCCAGCAA CGCAAAGCGG TAAAAACTTT TGAAGAGACT
AACAAAGAGC TCACTGTGGC TAACCTCTAC AACAAACGCA AAAGTGAAAA ACACAACCGA
CTTACCTTGA GACAAATAGC GATGAAGGAC ACCGACCTAT TTACGAGTTT CTTCCCTATT
ATCCTCACCA CCCCCGATGC TTGTTGCAAT CTGTTTGAGG GCAAGAATTT CTATTTCGAC
AATGTAGTGT TTGACGAGGC AAGTCAGCTG AAACTCGAAG ACAACCTGCC GGCAATGCTC
AAAGGCAAGA CGATTATCAT TGCAGGTGAT GAACACCAAA TGCCGCCGTC TAACTATTTT
AGCAAAGTAT TCGACGGTAC TGCCGAAGAT GATGATGACA ACGAGGAAGA AGATGAAGTA
CTCACCTACA AAAATGCGAT GCTGAACATA GAGTCGCTCT TGGATTACGC TTTGGAATAC
CATTTCAGTA AGAATCATTT AGATTTTCAC TATCGTTCTA AACACCCTTA TCTGATTGAT
TTTTCTAACC ACGCTTTCTA CAATGCCCGA TTGCGTCCGC TACCCAGCAC CGAAAGTCGT
ATCCCTATCC ATTTCACTCA GGTAAATGGC ACTTTTGATG AGCATATCAA CCGTGAGGAA
GCCGCCGAAG TATTGCGTAT CCTCTCGCAA ATAGAGCCTC GTCCTGACGG TACTTACCCA
TCGGTGGGGA TTGCGACCTT CAATATCACC CAGCGCAACT ACATACGCAA ACAGATACTC
CAAAAGCAAA ACGACCCTAC TCAAACGGCT TTCCGCGAGA AAATCAACGC CTTAGAACAA
GCAGGACTCT TTATCAAGAA CTTGGAGAAC ATACAAGGTG ATGAGCGCGA TATCATCATC
TTATCGGTAA CTTATGGCAA GAAGAAAGGC GGCAAGTTTG TACAGAGTTT TGGTCCGCTG
AACTTCACCA AAGGTTACAA ACTGCTGAAC GTGATTATCA CCCGCGCCAA GGAACAGATA
TACGTGTGCA ACTCTATCCC CGAAGAATTG TTAGCTACCT ATAAAGAGGC TTTAGCGCAA
GAAGGCGCTA ACAACCGCCG CGCTGTGCTC TACGCCTACC TCGCCTACGC CCGTGCCGTA
AGCAACGGCA ATGATGCACT CCGCCGTGAA ATCCTATCGG AACTCGACCT CTACGGACAC
AAACACACCG ATATCGACCA GCAAAGTAAA AGTGCTTTTA AAGAACAAAC CTACCGTCAG
CTTAAAGAAA AATACCCCGA CCAACGTATT ACAATGGACT ACGAGTTTGG TGGGTATACT
ATCGATATTT TGTTAGAGCC CAAAGAAGGC AAGCCCGTAG CTGTAGAATG CCTCAGCAAA
CCTCTTTACA ACAACGATTT AGCCTATTTA GAAGACCTAC ACAAGGAAAA AATATTGCTC
AACGCCGGCT TTGACTACAA AAGAAAATGG GCGAAATAA
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| Protein sequence | MNQEVFTALQ NKLKVGNRRG VHLNALPGAS RYKFDIARLS AIFKSLPERF ILDLLTLRNL
NFSFSIHDTE STNIDHRGAG SRTPEEGQAV KVNEKEEGKS VKEKGTREVA LEKLVDSIEN
LMFQSEVITS EKGVNTLGFG FPILLRRDMG DGQLTAAPIL IWSVKIKPAT QMNTWVISRS
EEDPIYLNEV LTNHLQNDSG VSLKPIPDEM LEDGKIDKPE LHSLCSDILN QLKVTQNLDF
LLNNYTEILP LKTKAAYEEL LSNKGDAFIE KSGILSLFEV QKQNIINDYE SLKKEFIPLQ
ATANEQFQSL SAIETDPSQQ SILESLKSQQ KILIQGPPGT GKSQTLTAIL INALENKQKT
LVVCEKQTAL EVLYNALQNK GLGRYCTMIK DAIADRRFIV DAVRNHIDNA EFKKETPAFL
ENLLTEQVQA MRKITTDINA IHHKLNQPLL NQLSWTDVMA ELMHYETDRE ELNLSAFSFQ
FTDEEFASLA PLWQQGEALY QRYAPYAQNH LFNPKKLTAT NLFNTQQQLA EAFKQYAQQW
EVIQQQIAVY KAYYLHKRKE EFIQQLDTLA QYRNEYELIT ATLPPTSPVY QPEVTKGFFY
KLSALFSAEK KQVLKTQKRL QELCTAIKAL SLHRNFLSIA ISDNLLLNKT VIAEYTPAIT
QAQTDFDSKV NADFVALDLL NYYERSFVNA DLDKLISEVK SLKNRIEADN WLDTLNFGNT
FAEFEAFITR SLATYNNYQA DPAQPLVAQY EWFAFFQSLN DFQERIVLSL TKVTHWEASF
LYAYYTLLLQ RNADDTLNFN ERDYADFKKK IHYFASAQKD FIEGYWNTQQ RKAVKTFEET
NKELTVANLY NKRKSEKHNR LTLRQIAMKD TDLFTSFFPI ILTTPDACCN LFEGKNFYFD
NVVFDEASQL KLEDNLPAML KGKTIIIAGD EHQMPPSNYF SKVFDGTAED DDDNEEEDEV
LTYKNAMLNI ESLLDYALEY HFSKNHLDFH YRSKHPYLID FSNHAFYNAR LRPLPSTESR
IPIHFTQVNG TFDEHINREE AAEVLRILSQ IEPRPDGTYP SVGIATFNIT QRNYIRKQIL
QKQNDPTQTA FREKINALEQ AGLFIKNLEN IQGDERDIII LSVTYGKKKG GKFVQSFGPL
NFTKGYKLLN VIITRAKEQI YVCNSIPEEL LATYKEALAQ EGANNRRAVL YAYLAYARAV
SNGNDALRRE ILSELDLYGH KHTDIDQQSK SAFKEQTYRQ LKEKYPDQRI TMDYEFGGYT
IDILLEPKEG KPVAVECLSK PLYNNDLAYL EDLHKEKILL NAGFDYKRKW AK
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