| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0990 |
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| Symbol | |
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| ID | 8367409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1158364 |
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| End bp | 1160328 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644983415 |
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| Product | alpha amylase all-beta |
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| Protein accession | YP_003141106 |
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| Protein GI | 256819827 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACC CACTATTGCT ACCATACCTC CCTGTTATTC AGGGAAGGCA TCAGCACTTT
ATCGATGTCC TTCATAGAGT GCAAGGGGAC GCTAAGTGCC TGGCTGATGC TTGTAATTCG
CACCTCTACT ACGGTCTGCA CCGTACTCAT ACAGAATGGG TGCTACGCGA GTGGGCTCCA
AATGCAACGG CTATCTTTCT TCTTTGCGAT AGCAACGACT GGCAAAAAAA CAAACACTAT
TCTTTCACTA AACTAAACGA CCAAGACTGG GAATTGCGTG TTCCTGCTAA TATCCTCCGC
CACGAAATGC TCTACAAACT ACTTGTGGAA TGGGAAGGAG GCAGTGGCGA ACGCCTCCCC
TCACATACTA CTCGTGCCGT GCAGGACGAC TATACCAAGG TGTTTTCTGC CCAAGTGTGG
TGCCCCGAGC ACCCCTACCC TTGGCAACAC CCACGCCCCA AAGCTACTCC ACATCCACTT
ATCTACGAAG CACATATAGG GATGAGTACC GAACACCAGC GCGTGAGTAC TTTTATAGAG
TTTCGCCTCT ATGTACTGCC CCGTATCGCA GCCTTGGGCT ATAACACAAT CCAACTGATG
GCAATACAAG AGCACCCTTA CTACGGCTCT TTTGGCTATC AGGTAGCTAA CTTCTTTGCG
GTGAGTTCAC GCTTTGGCAC CCCCGAAGAA CTCAAAGAAC TCATCGATGC TGCGCACGGC
TTGGGCATAC GTGTACTGCT TGATATTGTA CACTCGCATT CGGTGAGCAA CGAGGCAGAA
GGGCTCAGCC ACTTCGACGG TACCGACTAT CTTTACTTCC ACCGCGGTGA GCGCGGTAAA
CACCCTGCTT GGGACTCCCG CTGTTTTGAC TATGGTAAGC CCCAAGTACT GAATTTTTTA
CTTTCTAACT GTAAGTATTG GTTAGAAGAA TATCGCTTCG ACGGTTTCCG CTTCGACGGG
GTTACTAGTA TGATTTATTA CGATCACGGT TTAGGCAAAG CCTTTACCGA TTATAGTTTC
TATTATGATG GCAATGAGGA CGACGACGCT TTGGTGTATC TTACTATGGC TAACCAACTT
ATTCACGAGC TCTACCCCGA AGCGCTGACC ATTGCCGAAG AGATGAGCGG ATTGCCCGGT
CTTGCTTCGC CTATTGCTGA AAAAGGCATA GGCTTCGATT ACAAGCTGAG TATGGGTATT
CCTGATTATT GGATTAAGCT CCTTAAAGAA GTCCCCGATG AGCAGTGGCA CGTAGGCAAT
ATCTATTACG AATTGACTAA CAAACGCGCC GAAGAACGCA CCATCAGTTA TGCCGAAAGC
CACGACCAAG CCTTGGTGGG TGATAAAACG ATATTTTTCT GGCTTACTGA TAAGGAAGTG
TATACCGGAA TGAGCGTATT CGACCACAGT CTCATCATCG ACCGTGCGAT GGCTTTGCAC
AAGATGATAC GTTTGGTAAC TCTTGGTACC GCAGGTGGGG GATACCTCAA CTTTATGGGC
AACGAATGGG GACACCCTGA GTGGATTGAC TTTCCTCGCC AAGGCAACAA CTGGAGTTAT
GCACACGCAC GCAGGCTATG GAGTTTGGTA GACGACTCTA ACTTAAAGTT TAAATACCTC
AACGCTTTTG ATAGCGCGAT GATACACTTT GCTACCGATA GTAAGTTCCT AGACCGAGAA
CCCCATATAT TGGTGCGCGA CATCGAGCGA CAGCTACTCA TATTCGAGCG CAGTGGGTAC
TTATTTGTTT TCAGCTTCAA CCCCACCACC TCCTACACCG ATTATCAGTT TGATGTGCCA
GCAGGCAAGT ACACCACCAT ACTCAACACC GATAACCCCG CCTTTGGAGG TGATAACCGC
ATCGATGAAA GCGTAGAGCA TTTTACGCAG TACACCGGCA AGGAGAATTT GCTGTCGTTG
TATATACCCG CGAGAATTGG AATAGTATTA AAAATTGACA ATTGA
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| Protein sequence | MNDPLLLPYL PVIQGRHQHF IDVLHRVQGD AKCLADACNS HLYYGLHRTH TEWVLREWAP
NATAIFLLCD SNDWQKNKHY SFTKLNDQDW ELRVPANILR HEMLYKLLVE WEGGSGERLP
SHTTRAVQDD YTKVFSAQVW CPEHPYPWQH PRPKATPHPL IYEAHIGMST EHQRVSTFIE
FRLYVLPRIA ALGYNTIQLM AIQEHPYYGS FGYQVANFFA VSSRFGTPEE LKELIDAAHG
LGIRVLLDIV HSHSVSNEAE GLSHFDGTDY LYFHRGERGK HPAWDSRCFD YGKPQVLNFL
LSNCKYWLEE YRFDGFRFDG VTSMIYYDHG LGKAFTDYSF YYDGNEDDDA LVYLTMANQL
IHELYPEALT IAEEMSGLPG LASPIAEKGI GFDYKLSMGI PDYWIKLLKE VPDEQWHVGN
IYYELTNKRA EERTISYAES HDQALVGDKT IFFWLTDKEV YTGMSVFDHS LIIDRAMALH
KMIRLVTLGT AGGGYLNFMG NEWGHPEWID FPRQGNNWSY AHARRLWSLV DDSNLKFKYL
NAFDSAMIHF ATDSKFLDRE PHILVRDIER QLLIFERSGY LFVFSFNPTT SYTDYQFDVP
AGKYTTILNT DNPAFGGDNR IDESVEHFTQ YTGKENLLSL YIPARIGIVL KIDN
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