| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0988 |
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| Symbol | |
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| ID | 8367407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1155887 |
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| End bp | 1157842 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644983413 |
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| Product | Amylo-alpha-16-glucosidase |
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| Protein accession | YP_003141104 |
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| Protein GI | 256819825 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | [TIGR01561] glycogen debranching enzyme, archaeal type, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTATT TATCATTTAA AAAAGACCAA CTTATTAATC TTGAATACTC TCTGGATAGA
GAGTTTCTCG GTACGAACCG AGGGGGAGGC TACTGCTCCT CTACTCTCGT TTTTTGCAAT
ACCCGTAAAT ACCACGGGCT ACTGGTAGTG CCTATTGAAA AATTCAGAGG CAAAAACTAC
GTGATGCTCT CCTCCTTAGA TGAAAGTATC ATTCAGCACG GACGCGATTT CAATTTCGGC
GTTCATAAAT ACGAAGGTAC CTATGAACCG CGCGGGCATA AGTATATCGT AGATATTTCC
TACGAAAAAG CATTTACCGT TACTTACCAA GTAGGTGGCG TATTGCTGAA AAAAGAAATC
TTGATGATGC ACAATGCTCC CCAAGTATTG ATACGCTATA CGCTACTAGA AGCCCATTCG
GCTACCCTTT TGCGCCTAAA CCCTCTCTTG GCTTTTCGCG ATATACATTC TCTTAGCAAG
CAAAACCCCG TAGCCAACAC CCAAGCCGAA GCAGTAGGCG GTGGCGTGCG TGTAAAACTA
TACCCAGAGT TTCCTTACCT CTATATGCAA CTCAGCAAAT CCGCTAATTT TGGTGGTGGG
GCTTATTGGA ACAACAACAT CTATTATACC AAGGAAAAAG AGCGTGGTTA TGACTACCAA
GAAGACCTCC TCAGCGTAGG AGCTTTCGAA GTGAGCCTCA AAAAAGGAGA AAGTATCGTC
TTTTCAGCCA GCTTAGAGGA AGCTAATCCT AAAAACCTCG CTAAGGACTT TACCAAGTAC
CTCAAAGAAC GCGCCGACCG CAATTCGTTT GAAGAATGCT TGCAGTACGC CGCCTCTCAG
TTTATTATTC ACAAGGCAGG CGAAACCCGC ATCAAAGCAG GTTATCACTG GTTCGACAGC
AATATGCGCG ACACTTTTAT TGCCTTGCCA GGTATTGCTT TATCGGGCAG TACAGCCAAG
ATATTTGAAG ACGTGCTCAC CTCTACTCAA AAATACTTCT ACGAAGGGCT TTTTGCTAAG
GAAATCAGTA CACACAATAT ACACCCTGAG TATGATGCCG ACACCTCTCT GTGGTTCTTC
TGGACGCTTC AACAGTATGA AAAGGAAACT ATTAAGAGTA AGAAACAACT TTGGAAGGAG
TATGGCGATA CGCTCAAAAG TATCTTAAAC GCCTACAAGC AAGGCTCTCA TAAGAATATT
CGTATGGAAG CTAACGGACT TATATGGAGT GATGACCTTA CACGTCCGCT TACGTGGTTT
GATGCGCAAG GCGATTACGG CGCTATCGTG CCACGCAACG GTTATGTAGT AGAAGTGAAT
GCCCTCTGGT ATAATGCCGT GTGTTACGCA CTTGCCTTAG CAGAAGAAGC GAAAGACAAG
GCTTTCTTAG GCGAGTGGTT TACGCTACCT GAAACCATCG AAAAGAGCTT TGTAGAGACT
TTTTGGATAG AGGACAAGAA GTACCTTGCC GACTATGCCA ACCGCACGAA TAAAAACGTA
GATGTACGCC CCAATCAGCT CATCGTTTGT GCTCTCGACT ATGCTCCCAT AAACGAGAAG
ACTAAGAAGA GAGTATTGGA CATTGTTACC CAAGAGTTGC TCACCCCTCG CGGATTGCGC
AGTTTATCTC CTCAAAGCCC CCGTTATGAA GGCGTGAGTG TAGGCAATGT ATATGTGCGC
GACAAAGCCA CCTTCAACGG GTCAGCACAC CCTTGGTTTA TTGGGTTCTA TATAGAGGCT
TATCTGAAAA TCTTTGGAGC ACAGTACCTA CCAGAAGCGC AAGCTATCTT AGAAAATTTT
GAAGAAGAGC TCAACGAACA CGGTGTATGT ACTATATCGG CTATTTACGA CGGCAATCCA
CCATTCCACT CACGCGGTTG TATTGCCAAA GCTAAGAATG TAGCTGAGAT ATTACGTGCT
CAATGGCTAC TGAGCCAAAT GCCTGCAACA CTTTGA
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| Protein sequence | MSYLSFKKDQ LINLEYSLDR EFLGTNRGGG YCSSTLVFCN TRKYHGLLVV PIEKFRGKNY
VMLSSLDESI IQHGRDFNFG VHKYEGTYEP RGHKYIVDIS YEKAFTVTYQ VGGVLLKKEI
LMMHNAPQVL IRYTLLEAHS ATLLRLNPLL AFRDIHSLSK QNPVANTQAE AVGGGVRVKL
YPEFPYLYMQ LSKSANFGGG AYWNNNIYYT KEKERGYDYQ EDLLSVGAFE VSLKKGESIV
FSASLEEANP KNLAKDFTKY LKERADRNSF EECLQYAASQ FIIHKAGETR IKAGYHWFDS
NMRDTFIALP GIALSGSTAK IFEDVLTSTQ KYFYEGLFAK EISTHNIHPE YDADTSLWFF
WTLQQYEKET IKSKKQLWKE YGDTLKSILN AYKQGSHKNI RMEANGLIWS DDLTRPLTWF
DAQGDYGAIV PRNGYVVEVN ALWYNAVCYA LALAEEAKDK AFLGEWFTLP ETIEKSFVET
FWIEDKKYLA DYANRTNKNV DVRPNQLIVC ALDYAPINEK TKKRVLDIVT QELLTPRGLR
SLSPQSPRYE GVSVGNVYVR DKATFNGSAH PWFIGFYIEA YLKIFGAQYL PEAQAILENF
EEELNEHGVC TISAIYDGNP PFHSRGCIAK AKNVAEILRA QWLLSQMPAT L
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