| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0985 |
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| Symbol | |
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| ID | 8367404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1152908 |
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| End bp | 1154158 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644983410 |
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| Product | Alpha-amylase |
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| Protein accession | YP_003141101 |
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| Protein GI | 256819822 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.70753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT CAATTTGTAT CTATTTCCAA ATCCATCACC CCGAACGTCT TAGAAAGTAT
CAATTCTTCG ACATCGGCAA GAAACATAAT TACTTCGATA ATTACGCCAA TCGCTCTGAG
CTTGAAGATT TGGCTGAGCA TTGCTATCTA CCTGCTAACA CCTTGCTCTT GGAGCTTATC
AATAAATACA AAGGCAAGTT CAAAGTAGCT TTTTCCATCA CAGGAAGTGC TATCGACCAG
CTCGAAATGC ATACTCCTGA GGTGATACGC TCTTTCCAAG AACTCGCCCA AACCGGTAGT
GTAGAGTTTT TGGCAGAAAC TTATTCCCAC TCTTTGGCTT CGCTTTCCGA TGATACCGAT
GAGTTCGAAC AACAAGTAAA ACGACATACT ACGGCTATCA AACAGCTCTT TGGCAAGAAG
CCTGTAACTT TTCGCAACAC CTCTCTTATC TATTCCGATA CCATAGGCGA ACGCGTCGCA
AAACTCGGTT TCAAGACGAT GCTCACCGAT GGAGCTAAAC ACGTATTGGG TTGGAAGAGT
CCAAACTTTG TCTACAAAAA CGCTATCGAC AAAAACCTCA ACCTTTTGCT CAAAAACAGC
AAACTCAGCG ATGATATCGC CATACGCTTT TCCGATAGAA ATTGGAGTGA ATACCCACTC
ACTTCCGAAA AGTATATCAG TTGGGTGAAA AACAGCTTGC AAGATAGTGA GGTGCTCAAC
CTCTTTATGA ACTACGAGGT AATAGGCTAT TACAACAACG CCCAAAGCGG TATTTTCGAC
TTCTTGCGCT ATTTCATCAC CTATATGATG GAAGACGATA ACTATGAGTT CCTATTGCCT
AAGGAAGTAG CCAAAAAGCA CCCTGCTAAA GATGTATTGC CTGTGCCCTA CCCTATTTCG
TGGACAGACG AAGAGCGCGA TACCACCTCT TGGTTGGGTA ACGAGTTGCA AAAAGAAGCC
TTCCGAGAGC TCTTTAAGAT ACAACCAGAA GTAAGAAAGA AAAAGAACGC CGACCTCATA
GACGATTATA CTCGTCTGCA AGCCAGTGAG CACTTCTATT TTATGCGTAC TAAGCTTTTT
TCGGGGGCGG ACTATCACAA GTATCGTTTG CCTTATGACT CGCCCTACGA AGCCTTCATC
AACTATATGA ACGTGCTCAG CGATTTCATC GAAAGATGCA AACCACACGA GCAAGAAGAG
GTGCAAAGCA CACAAGTAAC AAAGAAAAAG AACCAAACAA GGAAAAAGTG A
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| Protein sequence | MKKSICIYFQ IHHPERLRKY QFFDIGKKHN YFDNYANRSE LEDLAEHCYL PANTLLLELI
NKYKGKFKVA FSITGSAIDQ LEMHTPEVIR SFQELAQTGS VEFLAETYSH SLASLSDDTD
EFEQQVKRHT TAIKQLFGKK PVTFRNTSLI YSDTIGERVA KLGFKTMLTD GAKHVLGWKS
PNFVYKNAID KNLNLLLKNS KLSDDIAIRF SDRNWSEYPL TSEKYISWVK NSLQDSEVLN
LFMNYEVIGY YNNAQSGIFD FLRYFITYMM EDDNYEFLLP KEVAKKHPAK DVLPVPYPIS
WTDEERDTTS WLGNELQKEA FRELFKIQPE VRKKKNADLI DDYTRLQASE HFYFMRTKLF
SGADYHKYRL PYDSPYEAFI NYMNVLSDFI ERCKPHEQEE VQSTQVTKKK NQTRKK
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