| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0960 |
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| Symbol | |
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| ID | 8367379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1119983 |
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| End bp | 1122154 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644983385 |
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| Product | glutamine synthetase catalytic region |
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| Protein accession | YP_003141076 |
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| Protein GI | 256819797 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3968] Uncharacterized protein related to glutamine synthetase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.879231 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAAGAT TCACCGCTCT TACTACCGCA CAAAACCGCA AACCGGTGGC GGTACCCGAA
AATGGCAAAC GCTCCGAACT GTTTGCCCAA AATGTATTCA ACGAAGAGGC TATGCGCCAA
CTGATGACCC GCGATGCCTT TGCCGCTGTA ATGAACGCCA TTCACAATGG CACTAAAATA
GACCGCCGTG TAGCCGACCA AGTGGCTACC GCTATGCGCG ATTGGGCAAT CTCCAAAGGC
GCTACCCACT ACACCCACTG GTTCCAACCT CTTACAGGGG GCACAGCCGA AAAGCACGAC
GCTTTCTTTG AGCCTGTTAC TCGCGACCGC GCTATCGAAC GCTTCGGGGG CGGACAGCTC
GTACAACAAG AGTCCGACGC TTCCAGTTTC CCCAATGGTG GTATCCGCAA TACTTTTGAG
GCGCGGGGCT ACACCGCTTG GGATCCTTCT TCACCGCCTT TTGTATATGG CACCGTGCTT
TGTATCCCTA CAATATTCAT TGCCTATACC GGCGAGGCGT TGGACAATAA AACGCCTTTG
CTCAAAGCTC TTAGCGTTAT CGACCAAGCA GCTACCGAGG TTGCCCGCTA TTTCGACAAA
AATGTGAGCA AAGTCACCAC TACCTTAGGC TGTGAACAAG AGTACTTCCT CATCGATAAA
GCCCTTGCCA ATACCCGCCC CGATTTGATG ATTACCGGTC GCACCCTCTT AGGGCATCAA
GCGGCTAAGG GGCAACAGTT GGACGACCAC TATTTAGGGG CAATTCCAAG CCGTGTGTTG
GCTTTTATGC GCGATTTGGA GCAAGAGTGT CTATTGCTCG GAATCCCCGT CAAAACGCGT
CATAACGAGG TCGCGCCTAA CCAGTTTGAG TTGGCGCCTA TTTTTGAAGA AGCCAACCTT
GCTGTCGATC AAAACTCTCT GCTGATGGAC GTGATGCGCA AAGTAGCCGA ACGCCACGAC
TTTGTGATCC TATTCCACGA AAAACCCTTT GCAGGGGTCA ATGGTTCGGG CAAGCATAAC
AACTGGTCGC TTGTAACTGA TACAGGCGTA AACCTCTTGG CGCCTAGCAA AACGCCTATC
AAGAACCTGC AATTCCTCAC TTTCTTCATC TGTACTATCA AGGCAGTATG TGAATACGAG
CCTTTGTTAA GAGCCTCGGT GGCATCAGCA ACTAATGATT ACCGATTAGG CGCTAATGAA
GCACCGCCTG CCATAGTATC GGTGTTTATA GGCGAACAGC TTACCCAAGT CTTAGATGCC
TTAGAAGTGT CGTCCGATAA CCTATCTCCC GAAGAAAAAA CCGAACTCAA ACTGAATGTA
GTAGGCAAAA TACCCGACCT CTTTCTCGAT ACTACCGACC GCAATCGCAC CTCACCTTTT
GCCTTTACGG GCAACAAGTT CGAGTTCCGT GCCGTGGGCT CTAAAGCCAA TTGTGGCAAG
CCTACAATGG TACTGAGCAC CATAGTAGCT CAACAACTCA CCGAGTTTAA GAAGGCAGTT
GATGCGCTCA TCGAAGGAGG CAAGAAGAAA GAAGATGCTA TTTTTAAAGT GTTGCGCCGC
TACATTAAGG AAAGTAAGAA AATACGCTTT GAAGGCGACG GTTATAGCAA AGAATGGGAG
GAAGAGGCTG CTCGCCGTGG TTTGAGTAAT CATAAAACGA CACCTGAGGC ACTGAAAGAA
AACATCAGTG AGAAGGCTGT GGCTTTGTTT GAAAGTACAG GAGTACTCAG CAAAGTAGAG
CTTTTAGCGC GTTATGAAAT TGGCTTAGAA GAATACGTGA AAACCGTGCA GATAGAATCG
CGTGTATTAG GCGATATTGC CCGTAATCAC GTGGTGCCAA CAGCCGTGCG TTACCAAAAC
ACCCTTATTG AGAACGTGAA AGGCTTAAAA GAAATATTTG GCGATAGCTA CCAAGAAGTC
GCTGCCGAGC AAATGGAACT CATACGCCAT ATTTCCGAGC ATATCAAGGT GATCCACAGT
CAGGTAGAGG CAATGGTAGA GGCGCGAAAG CACGCTAATC ACTTACCCGA TTTTGAAGCT
AAAGCCGATG CTTATTGCAA TGAGGTCAAA CCTTTCTTTG AGATAATACG CTACCATTGC
GACAAACTCG AACTTATGGT AGACGACGAA CTTTGGACAC TGACAAAATA CCGCGAATTG
TTTTTTAATT AG
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| Protein sequence | MLRFTALTTA QNRKPVAVPE NGKRSELFAQ NVFNEEAMRQ LMTRDAFAAV MNAIHNGTKI
DRRVADQVAT AMRDWAISKG ATHYTHWFQP LTGGTAEKHD AFFEPVTRDR AIERFGGGQL
VQQESDASSF PNGGIRNTFE ARGYTAWDPS SPPFVYGTVL CIPTIFIAYT GEALDNKTPL
LKALSVIDQA ATEVARYFDK NVSKVTTTLG CEQEYFLIDK ALANTRPDLM ITGRTLLGHQ
AAKGQQLDDH YLGAIPSRVL AFMRDLEQEC LLLGIPVKTR HNEVAPNQFE LAPIFEEANL
AVDQNSLLMD VMRKVAERHD FVILFHEKPF AGVNGSGKHN NWSLVTDTGV NLLAPSKTPI
KNLQFLTFFI CTIKAVCEYE PLLRASVASA TNDYRLGANE APPAIVSVFI GEQLTQVLDA
LEVSSDNLSP EEKTELKLNV VGKIPDLFLD TTDRNRTSPF AFTGNKFEFR AVGSKANCGK
PTMVLSTIVA QQLTEFKKAV DALIEGGKKK EDAIFKVLRR YIKESKKIRF EGDGYSKEWE
EEAARRGLSN HKTTPEALKE NISEKAVALF ESTGVLSKVE LLARYEIGLE EYVKTVQIES
RVLGDIARNH VVPTAVRYQN TLIENVKGLK EIFGDSYQEV AAEQMELIRH ISEHIKVIHS
QVEAMVEARK HANHLPDFEA KADAYCNEVK PFFEIIRYHC DKLELMVDDE LWTLTKYREL
FFN
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