Gene Coch_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0838 
Symbol 
ID8367257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp999668 
End bp1000375 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content34% 
IMG OID644983264 
ProductKWG repeat protein 
Protein accessionYP_003140955 
Protein GI256819676 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAC TATTTATTAT TACTTTAGCT TTGTTCTGTA CGGCTTGTAA TACCGATTGG 
CGCAGAAAAT ACGATGAGGT ATATCCGTCT CAAAACGGAA TTTCAATGGT AAGAAGAGAT 
AATAAATACG GACTCGTAAA TGCCGAAGGT ACCGTCGTAG CACCTTTGAA GTATGATTAT 
ATCAATATCT ACCCTTCTGC CGAAATACCT TTTTATGATG TTACCATTAA TAATTTATAT 
GGGGTGATAC GCCCTTCGGG TGAAGAACTC ATTCCTGCTC AGTATAATTT TATTTCGTAT 
TCCGAAGGTG TTTTTATTGT ACAACTCAAT GATAAGAAAA AACTTCTTAG TACTAATAAC 
GAAACACTCA CCCCTTGGTA TGACGAAATA GACTTCTTTT TCGGTGGTCT GGCTCGTGTT 
AAACAAGGTA ATAAGTATGG CTATTTAAAT ACTAAAGGTA AAGTAGTATT GCCTTTTGTA 
TATGATGACG CTGATGATTT CAACGATAGT AAAAAGGCAA TGGTGAAGTA TAAAGGTAAG 
TGGGGAATGA TTGATAATCT CGGTAATACA ATCATTCCTT TTGAATATGA ACAGGCTGAA 
CCCTATACTA AAAGCAATGA GGAATGGGAA GATTATTACT ATATCCTCAT AAAGAAAGGC 
AGAGAGGTAA ATATAGATAA AGAAGGTAAT CTTTTGTCAT TTAAATAA
 
Protein sequence
MKRLFIITLA LFCTACNTDW RRKYDEVYPS QNGISMVRRD NKYGLVNAEG TVVAPLKYDY 
INIYPSAEIP FYDVTINNLY GVIRPSGEEL IPAQYNFISY SEGVFIVQLN DKKKLLSTNN 
ETLTPWYDEI DFFFGGLARV KQGNKYGYLN TKGKVVLPFV YDDADDFNDS KKAMVKYKGK 
WGMIDNLGNT IIPFEYEQAE PYTKSNEEWE DYYYILIKKG REVNIDKEGN LLSFK