| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0834 |
|---|
| Symbol | |
|---|
| ID | 8367253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 996506 |
|---|
| End bp | 997018 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644983260 |
|---|
| Product | outer membrane chaperone Skp (OmpH) |
|---|
| Protein accession | YP_003140951 |
|---|
| Protein GI | 256819672 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2825] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TCATCTTAAC AGGCGTAGCA CTGCTCGCCC TTACTGCTTG TACCGACAAG
GTGGCGTTTG TAGATAACTC TAAACTTCTA AACGACTATC AAGAAAAAAA AGACATCGAG
GCAAAACTAA AAGGACAAAT TAGTGCCTAC GAACGAAAAC GCGACAGTAT TTCAATGGCG
TTCCAAACTG AAGCGCGTGC TTTCGACGCT CAGGCTAAAA CTCTCCCTCA GAACGTAGCT
CAGAAAAAAT ACAACGAACT GATGCAAAAA AGCCAAATAT TGCAACAACA TTTGCAACAA
GAGGAACAAA AAATACAAAT GGAAAGCCAA ACTCAAATGG ATTCTTTACT CAGCAAAGTG
AAGAAAAATA TTAAAGAGTA CGGAAAACAA AAAGGTTACA CTTTCATTCT TGGTGCTAAT
GACGGCGGTA GTGTACTCTA CGGTACTGAG AAAAAAGATA TTACCAAAGA AGTTACTGAA
TACTTAAATA ATCAATACAA AGATAAGAAG TAA
|
|---|
| Protein sequence | MKKLILTGVA LLALTACTDK VAFVDNSKLL NDYQEKKDIE AKLKGQISAY ERKRDSISMA
FQTEARAFDA QAKTLPQNVA QKKYNELMQK SQILQQHLQQ EEQKIQMESQ TQMDSLLSKV
KKNIKEYGKQ KGYTFILGAN DGGSVLYGTE KKDITKEVTE YLNNQYKDKK
|
|---|
| |