Gene Coch_0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0833 
Symbol 
ID8367252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp995722 
End bp996387 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content34% 
IMG OID644983259 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_003140950 
Protein GI256819671 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGCGG ATGTATTGCT TGCATTACCT TTAGGCTTGT TGTTAGCTTT TACCATAGGT 
CCTGTGTTCT TTGTATTGCT GGAAACAGCC ATTACTAAAG GATTCAGGGC GGCTATTGCT 
TTCAATTCTG GAGTAGTATT AGCCGATGCT ATTTTCATTC TCATTGTCTA TTTCACTACC 
AGCAGTCTGT TGCGCGAAAT TAAGGACGAT CCTAAACTCT TCTTTGCTGG TGGGCTCATA 
ATGATAACTT ACGGACTCAT CTCGTTCATC AAACTAAAAA AAGACTTCAA GAAAACAATA 
GATAACAAAG AGAATGCCTA TTTGCAAGTA GCTGAGAAAG TGAACTATGT AGCCCTCTTT 
ATCAAAGGTT TTCTACTGAA TTTTATCAAC ATAGGCGTTT TGGGTTTTTG GTTGGGAATT 
ATTATTGTTT TTGGTCCTAA ACTCGATATG AATGCCAGTA GAATATTTGT ATTTTTCACT 
TCTATTATTT TAGTATACTT TGGTATAGAT ATTTTTAAAA TTCTCATTGC TAAGAAACTC 
AAAAACCGAC TTACTGCTTT TCATATTTAC AAAATTAAAC GCGCGATTAG CATTATATTG 
TTAGTCTTTG GAGTTTTCTT GATACTTCAA GCATTCTTTC CTAACGTATT ACAATTAACT 
GATTAA
 
Protein sequence
MFADVLLALP LGLLLAFTIG PVFFVLLETA ITKGFRAAIA FNSGVVLADA IFILIVYFTT 
SSLLREIKDD PKLFFAGGLI MITYGLISFI KLKKDFKKTI DNKENAYLQV AEKVNYVALF 
IKGFLLNFIN IGVLGFWLGI IIVFGPKLDM NASRIFVFFT SIILVYFGID IFKILIAKKL 
KNRLTAFHIY KIKRAISIIL LVFGVFLILQ AFFPNVLQLT D