Gene Coch_0828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0828 
Symbol 
ID8367247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand+ 
Start bp990548 
End bp991132 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content43% 
IMG OID644983254 
ProductTatD-related deoxyribonuclease 
Protein accessionYP_003140945 
Protein GI256819666 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.137921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCTCG ACGTTCATTC GCATACCCAG CATTCAACTT CCGATACTTT GGTGATTCGC 
AATCAATATC CACTTACCGC CGATATTAGC GAACCTTTCT CAGTAGGTAT TCACCCTTGG 
TTTTTAAACG ATTTTGAGGC GCAGTGGAAT GCACTCATAC CCTTAGCCCA GCATTTCAAC 
TGCTGGGCAA TAGGTGAATG TGGTCTCGAT AAGAACGTTA CCTCTCCCCT ACCCTTACAA 
CAAGAAATCT TTCTAAGGCA CATAGAATTA GCCGAAAGTT TAGAGCTCCC ACTTATCATT 
CACTGTGTGA AAGCTTATGC CGAAGTAATA CAACTCCGCA AACGCACCCG CTCACAACAG 
TTATGGATAT TGCACGGCTT CAGAAAAAAC CTAAAAGTAG CACAAGAGCT CATTGCTCAC 
GGCATTGCCA TTTCTTTTGG CACTCCCCTA CTCTATTCTC ATCAATTGCA AGAAGTCTTT 
AAGAAAATCC CCCCTGAATA CCGGTTTTTT GAAAGCGATG ACAGCATTCA ACCATTAGTT 
ATCAAACAAG TCAAACAAGC CAGATTTATC ACGTCTGAAA CCTAA
 
Protein sequence
MYLDVHSHTQ HSTSDTLVIR NQYPLTADIS EPFSVGIHPW FLNDFEAQWN ALIPLAQHFN 
CWAIGECGLD KNVTSPLPLQ QEIFLRHIEL AESLELPLII HCVKAYAEVI QLRKRTRSQQ 
LWILHGFRKN LKVAQELIAH GIAISFGTPL LYSHQLQEVF KKIPPEYRFF ESDDSIQPLV 
IKQVKQARFI TSET