Gene Coch_0809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0809 
Symbol 
ID8367227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp969241 
End bp970617 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content42% 
IMG OID644983235 
Productprotein involved in gliding motility GldK 
Protein accessionYP_003140926 
Protein GI256819647 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03525] gliding motility-associated lipoprotein GldK 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTATGG CAAGAAGAAT ATTTGTAATG CTACTTGTAC TATTAGTACT AGCTGCGTGT 
AAGCGTGGCG GTGGCGACAG CAAAGGAGAG CTTGTAGGTG TTAAGGGGAA GAGCTGGAAA
CAGCCTGCTC CTTACGGTAT GACGCTTATT CCGAGTGGTT CTTTCATTAT GGGTAGTTCC
GATGATGATA AAACTGCGAG TTTTAACGCA CCAGTGAAAA CTGTGAGCGT GGGGTCGTTC
TATATGGACG AAACCGAAAT CACAAATAGT GAGTATCGCC AGTTCGTGAA TTGGGTTCGC
GATTCAATTA TCCGTACTCA GTTAGCTGAA ATGGCGGAAC AAACCGGTCA GACCCAAGGC
AGTGGAGGTA TCGGTGAATA CGCATACTTA GATGCGAACA CCGAGAAGAT GAATGCTTAT
CAGCAGTATC TTCAAAACAC ATATGGCGAC CAAAAAGCAC GAAAATTGAA CAAGAAAGTA
GCACTTATTT GGGACACTAA TAAATTCCCA GATGAATACT ACTCGGAAGT AATGGACAAA
ATGTATTTGC CCGAAGAAGA AGCTTACAAT GGCAAACGCA TTATGGACGT TCAGAAGTTC
GAGTTTAAAT ATCAATGGCT TGATATGGAT AAAGCCGCTC GTACGCGTGG TAACCGTAAA
GACTTCATTA AAGAGGAAAT CGTGAAAGTA TATCCTGATA CTACTGTGTG GATTCGCGAC
TTCAACTATT CTTATAACGA GCCAATGCAC AACGACTATT TTTGGCACGA AGCTTATGGC
GACTATCCTG TGGTAGGGGT TAGTTGGATT CAAGCCAAAG CCTTCTGTGA ATGGCGTACT
CTTAACAAAA ACTCTTATCA AAAATCAAAA GGTGATTACA CAGTAAACTC TTTCCGTTTG
CCAATTGAAT CGGAATGGGA ATACGCAGCA CGTGGTGGTC TGCCAGGAGG TACTTATCCT
TGGGGAGGTC CTTATACCTA TGATGATAGA GCTTGTTTCC TTGCAAACTT TAAACCAATG
CGTGGTGACT ATGCTGTTGA TAATGCACTC TATACCGTAG AAGCTAAGTC GTACGAACCT
AATGGTTACA ACCTTTACAA TATGGCAGGT AACGTATCAG AATGGACAAA CACCTCATAT
GACCCCAATT CATATGAATA TATGTCTACT ATGAATCCTA ACGTACTTGA TGACAAAAAT
CACCGTAAAG TAATACGTGG AGGTTCTTGG AAGGACGTTG CCTTTATGTT ACAAGTAAAT
ACCCGTGATT ATGAGTACCA AGACTCAGCC CGTAGTTATA TAGGGTTCCG TACCGTACAA
GATTTTATGG GTATCAGCGA CAAACAACAA GCTAAATCAG CAAGAGGATA CAGATAG
 
Protein sequence
MFMARRIFVM LLVLLVLAAC KRGGGDSKGE LVGVKGKSWK QPAPYGMTLI PSGSFIMGSS 
DDDKTASFNA PVKTVSVGSF YMDETEITNS EYRQFVNWVR DSIIRTQLAE MAEQTGQTQG
SGGIGEYAYL DANTEKMNAY QQYLQNTYGD QKARKLNKKV ALIWDTNKFP DEYYSEVMDK
MYLPEEEAYN GKRIMDVQKF EFKYQWLDMD KAARTRGNRK DFIKEEIVKV YPDTTVWIRD
FNYSYNEPMH NDYFWHEAYG DYPVVGVSWI QAKAFCEWRT LNKNSYQKSK GDYTVNSFRL
PIESEWEYAA RGGLPGGTYP WGGPYTYDDR ACFLANFKPM RGDYAVDNAL YTVEAKSYEP
NGYNLYNMAG NVSEWTNTSY DPNSYEYMST MNPNVLDDKN HRKVIRGGSW KDVAFMLQVN
TRDYEYQDSA RSYIGFRTVQ DFMGISDKQQ AKSARGYR