Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0809 |
Symbol | |
ID | 8367227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 969241 |
End bp | 970617 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644983235 |
Product | protein involved in gliding motility GldK |
Protein accession | YP_003140926 |
Protein GI | 256819647 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03525] gliding motility-associated lipoprotein GldK |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTATGG CAAGAAGAAT ATTTGTAATG CTACTTGTAC TATTAGTACT AGCTGCGTGT AAGCGTGGCG GTGGCGACAG CAAAGGAGAG CTTGTAGGTG TTAAGGGGAA GAGCTGGAAA CAGCCTGCTC CTTACGGTAT GACGCTTATT CCGAGTGGTT CTTTCATTAT GGGTAGTTCC GATGATGATA AAACTGCGAG TTTTAACGCA CCAGTGAAAA CTGTGAGCGT GGGGTCGTTC TATATGGACG AAACCGAAAT CACAAATAGT GAGTATCGCC AGTTCGTGAA TTGGGTTCGC GATTCAATTA TCCGTACTCA GTTAGCTGAA ATGGCGGAAC AAACCGGTCA GACCCAAGGC AGTGGAGGTA TCGGTGAATA CGCATACTTA GATGCGAACA CCGAGAAGAT GAATGCTTAT CAGCAGTATC TTCAAAACAC ATATGGCGAC CAAAAAGCAC GAAAATTGAA CAAGAAAGTA GCACTTATTT GGGACACTAA TAAATTCCCA GATGAATACT ACTCGGAAGT AATGGACAAA ATGTATTTGC CCGAAGAAGA AGCTTACAAT GGCAAACGCA TTATGGACGT TCAGAAGTTC GAGTTTAAAT ATCAATGGCT TGATATGGAT AAAGCCGCTC GTACGCGTGG TAACCGTAAA GACTTCATTA AAGAGGAAAT CGTGAAAGTA TATCCTGATA CTACTGTGTG GATTCGCGAC TTCAACTATT CTTATAACGA GCCAATGCAC AACGACTATT TTTGGCACGA AGCTTATGGC GACTATCCTG TGGTAGGGGT TAGTTGGATT CAAGCCAAAG CCTTCTGTGA ATGGCGTACT CTTAACAAAA ACTCTTATCA AAAATCAAAA GGTGATTACA CAGTAAACTC TTTCCGTTTG CCAATTGAAT CGGAATGGGA ATACGCAGCA CGTGGTGGTC TGCCAGGAGG TACTTATCCT TGGGGAGGTC CTTATACCTA TGATGATAGA GCTTGTTTCC TTGCAAACTT TAAACCAATG CGTGGTGACT ATGCTGTTGA TAATGCACTC TATACCGTAG AAGCTAAGTC GTACGAACCT AATGGTTACA ACCTTTACAA TATGGCAGGT AACGTATCAG AATGGACAAA CACCTCATAT GACCCCAATT CATATGAATA TATGTCTACT ATGAATCCTA ACGTACTTGA TGACAAAAAT CACCGTAAAG TAATACGTGG AGGTTCTTGG AAGGACGTTG CCTTTATGTT ACAAGTAAAT ACCCGTGATT ATGAGTACCA AGACTCAGCC CGTAGTTATA TAGGGTTCCG TACCGTACAA GATTTTATGG GTATCAGCGA CAAACAACAA GCTAAATCAG CAAGAGGATA CAGATAG
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Protein sequence | MFMARRIFVM LLVLLVLAAC KRGGGDSKGE LVGVKGKSWK QPAPYGMTLI PSGSFIMGSS DDDKTASFNA PVKTVSVGSF YMDETEITNS EYRQFVNWVR DSIIRTQLAE MAEQTGQTQG SGGIGEYAYL DANTEKMNAY QQYLQNTYGD QKARKLNKKV ALIWDTNKFP DEYYSEVMDK MYLPEEEAYN GKRIMDVQKF EFKYQWLDMD KAARTRGNRK DFIKEEIVKV YPDTTVWIRD FNYSYNEPMH NDYFWHEAYG DYPVVGVSWI QAKAFCEWRT LNKNSYQKSK GDYTVNSFRL PIESEWEYAA RGGLPGGTYP WGGPYTYDDR ACFLANFKPM RGDYAVDNAL YTVEAKSYEP NGYNLYNMAG NVSEWTNTSY DPNSYEYMST MNPNVLDDKN HRKVIRGGSW KDVAFMLQVN TRDYEYQDSA RSYIGFRTVQ DFMGISDKQQ AKSARGYR
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