Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0787 |
Symbol | |
ID | 8367205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 950118 |
End bp | 950648 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644983214 |
Product | hypothetical protein |
Protein accession | YP_003140905 |
Protein GI | 256819626 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTATA TACAAGACTA CCTATATCAA ATTATTGCTA CTGCCATTAC ATTGGTGGTC TTTATTGCTT TGCGTTACTT GGTGAACTCC ATCATCAATA AGTTCGGAAA AAAAGCGGAG TTCGTAGAGA GTCGTACTCA TTTAGTAAAG AAGTATATAG ACTATTTTAT TTATGCGCTA GCTATCCTTA CCATTGTCTC TATTTGGGGA ATAAAAACCG AACAGCTATT CCTTTTTGTT ACTTCGATAC TTACCGTAAT AGGGGTAGCA TTTTTTGCCC AATGGTCGAT TTTGAGCAAT ATTACAGCGG GGATTATCGT GTTTTTCTCT TCTCCGTTTA GAATAGGTGA TACGATTAAG ATTTTAGATA AAGATTATCC TATCGAGGCT AAAATAATCG ATATAAAATC TTTCTATACT CTTTTGAAAA CAACAGAAGG CGAACAGATA AGTTTGCCGA ATAATCTTTT GCTCCAAAAA GGGATTGTAA TTGTTTCGGA AAAGAAATAT GCGGTGAAGA TAAAACCGTA A
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Protein sequence | MNYIQDYLYQ IIATAITLVV FIALRYLVNS IINKFGKKAE FVESRTHLVK KYIDYFIYAL AILTIVSIWG IKTEQLFLFV TSILTVIGVA FFAQWSILSN ITAGIIVFFS SPFRIGDTIK ILDKDYPIEA KIIDIKSFYT LLKTTEGEQI SLPNNLLLQK GIVIVSEKKY AVKIKP
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