Gene Coch_0787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0787 
Symbol 
ID8367205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp950118 
End bp950648 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content34% 
IMG OID644983214 
Producthypothetical protein 
Protein accessionYP_003140905 
Protein GI256819626 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTATA TACAAGACTA CCTATATCAA ATTATTGCTA CTGCCATTAC ATTGGTGGTC 
TTTATTGCTT TGCGTTACTT GGTGAACTCC ATCATCAATA AGTTCGGAAA AAAAGCGGAG
TTCGTAGAGA GTCGTACTCA TTTAGTAAAG AAGTATATAG ACTATTTTAT TTATGCGCTA
GCTATCCTTA CCATTGTCTC TATTTGGGGA ATAAAAACCG AACAGCTATT CCTTTTTGTT
ACTTCGATAC TTACCGTAAT AGGGGTAGCA TTTTTTGCCC AATGGTCGAT TTTGAGCAAT
ATTACAGCGG GGATTATCGT GTTTTTCTCT TCTCCGTTTA GAATAGGTGA TACGATTAAG
ATTTTAGATA AAGATTATCC TATCGAGGCT AAAATAATCG ATATAAAATC TTTCTATACT
CTTTTGAAAA CAACAGAAGG CGAACAGATA AGTTTGCCGA ATAATCTTTT GCTCCAAAAA
GGGATTGTAA TTGTTTCGGA AAAGAAATAT GCGGTGAAGA TAAAACCGTA A
 
Protein sequence
MNYIQDYLYQ IIATAITLVV FIALRYLVNS IINKFGKKAE FVESRTHLVK KYIDYFIYAL 
AILTIVSIWG IKTEQLFLFV TSILTVIGVA FFAQWSILSN ITAGIIVFFS SPFRIGDTIK
ILDKDYPIEA KIIDIKSFYT LLKTTEGEQI SLPNNLLLQK GIVIVSEKKY AVKIKP