| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0777 |
|---|
| Symbol | |
|---|
| ID | 8367195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 936955 |
|---|
| End bp | 937719 |
|---|
| Gene Length | 765 bp |
|---|
| Protein Length | 254 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644983204 |
|---|
| Product | pantothenate kinase |
|---|
| Protein accession | YP_003140895 |
|---|
| Protein GI | 256819616 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
|---|
| TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAA TAATAGACGA AGGTAATACG TCCATAAAAG TAGCGCTGTT CAAAAAAGGA
ATACAAACAT TCTTTCTTTC CTTTGCCAAA GACGGTTTTC AAGAATCTTT TTTAAGCAAA
GTACCTTTAA ACGAGGTAAC TCATTGCATC ATCGCTTCGG TGGTAACAGA AGTTAAAGAG
CGTTTCTCTT TCTTAGAACA ACTCCTGCCA GATGTGTTAT ACCTCACAGC TGAAACCCCT
GTGCCTTTCG TCAATAAGTA TGCAACCCCT CACTCGTTAG GTATCGACCG TTTGGCTCTG
GTAGCAGGTG CGGTGACACG TTTTCCCAAC CGCAACGTAC TCATTATCGA CGCGGGTACC
TGCATTACTT TTGATATAGT TACCGATAGA AAAGAGTACC TCGGGGGAGC TATCGCCCCA
GGGATAGCAA TGCGCCTAAA AGCGATGCAC CATTTCACTT CCAAACTGCC ATTAGTATCC
GAACAGTTTT TTGATACTGA ACAGTTTATA GGAAATACTA CCGAAAGCTG TATGCTCTCA
GGTGTCTATC ACAATGTGGC GTGCGAAATC GAGGGAGTGA TTAAAAAATA CGAAGCAAAA
TTCCCTTCGC TTATCACTAT TTTAACAGGG GGTAATCAAA ATTATTTGCA AGAAAGAATA
AAAAATCAGA TATTTGCAGG CTCATACGTG TTGCTCGAGG GGCTCAATGC CATCTTAGAA
TATCAAACAA AAGAAGGAGA GGCACACGTT ACTAATATTG GATAA
|
|---|
| Protein sequence | MNLIIDEGNT SIKVALFKKG IQTFFLSFAK DGFQESFLSK VPLNEVTHCI IASVVTEVKE
RFSFLEQLLP DVLYLTAETP VPFVNKYATP HSLGIDRLAL VAGAVTRFPN RNVLIIDAGT
CITFDIVTDR KEYLGGAIAP GIAMRLKAMH HFTSKLPLVS EQFFDTEQFI GNTTESCMLS
GVYHNVACEI EGVIKKYEAK FPSLITILTG GNQNYLQERI KNQIFAGSYV LLEGLNAILE
YQTKEGEAHV TNIG
|
|---|
| |