| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0723 |
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| Symbol | rpsB |
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| ID | 8367140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 878409 |
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| End bp | 879134 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644983149 |
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| Product | 30S ribosomal protein S2 |
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| Protein accession | YP_003140841 |
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| Protein GI | 256819562 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0052] Ribosomal protein S2 |
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| TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAATA ACATAGAAAT TAAAGATTTA TTAGATGCAG GCGTACATTT CGGTCACCTT
ACCCGCAAAT GGAATCCTAA TATGGCTCCC TACATCTATA TGGAACGCAA CGGTATCCAC
GTAATCAACT TGTACAAAAC CGCTGCTAAA ATTGAAGAGG CTGCTGAAGC CCTCAAAAAA
ATCGTAGCCT CTGGCAAAAA AGTGCTTTTT GTGGCTACTA AAAAACAAGC AAAAGACGTA
GTTGCCGAAA AAGCAACTTC AGTAAAAATG CCTTACATCA CCGAGCGTTG GCCTGGTGGT
ATGCTTACTA ACTTTGTAAC TATCCGTAAG GCAGTAAAGA AAATGTCGTC TATCGATAAA
ATGAAAAAAG ACGGTACTTT CGATACCCTT TCAAAACGTG AAAAACTACA CGTAGAACGT
ATGCGCGAAA AACTCGAAAA GAACTTAGGG TCTATCGCCG ATATGTCTCG CCTCCCTGGT
GCTCTATTTG TAGTCGATAC ACTCCGTGAA CACATCGCTG TAAGAGAAGC GCAAAAATTA
AACATTCCTA TTTTCGCAAT GGTAGATACA AACTCCGACC CTCGTGAGGT GGATTTTGCT
ATCCCTGCTA ACGACGACGC TTCTAAAGCT ATCGAAAAAG TACTTTCTTA CATCACCGAA
GCTGTAAACG AAGGTCTTTC AGGTAGAACA GCCGACGCTA ACAAAGAAGC TGAAGCAGCT
GAATAA
|
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| Protein sequence | MANNIEIKDL LDAGVHFGHL TRKWNPNMAP YIYMERNGIH VINLYKTAAK IEEAAEALKK
IVASGKKVLF VATKKQAKDV VAEKATSVKM PYITERWPGG MLTNFVTIRK AVKKMSSIDK
MKKDGTFDTL SKREKLHVER MREKLEKNLG SIADMSRLPG ALFVVDTLRE HIAVREAQKL
NIPIFAMVDT NSDPREVDFA IPANDDASKA IEKVLSYITE AVNEGLSGRT ADANKEAEAA
E
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