Gene Coch_0702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0702 
Symbol 
ID8367119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp858464 
End bp859411 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content30% 
IMG OID644983129 
Productglycosyl transferase family 2 
Protein accessionYP_003140821 
Protein GI256819542 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAC ATAAAAAAAT ATTGAGTATC TGTATTCCTA CTTATAATAG GGCAAAGATA 
TTAGACAACG CTCTAAATGC TATACAAAAA GAGCTGAAAA CAATTGATTG CAGCAAGATA
GAACTTATTG TATCTGATAA CTGTTCTCCT GATAACACTG AGGAGGTAGT AGAGAACTAC
ATTCAAGCAG GAATGCCTAT CGTTTATAGC AAAAACCATA CTAATTTAGG TATGGATGGC
AATTTTGTAC AGTGTTTTAA AAAAGCAAGC GCTCAATATG TTTGGGTATT AGGGGATGAT
GATTTTTTAA AAGAAGGCGC TTTGTCCTTC TTATTGGCTA GCCTCAAGAA TACTAATTAT
GGATTGATTC ACCTCAAGAT TTTTCCTAAA GGAAATGAAG AAATACAAAT ATATCAAACT
ATTGAAGATT ATTTAAGTGA TATTAGCTAT TGGATAACAT TTATAAGTTC AAATATCGTA
GCTACTAAAT TTGTTCCCCT TATTAACTTT GAAAAATATA TGGGGACGTG GTTTACCCTT
ATTCCTCTTT ATATAACAGC AGCTAAAGAA AGTTCCAAAA ACCTAATGAT TAATAAACGG
ATTTTTGAAG ATGCTGCTGA TGGGGCTACT AATGGAGGCT ATAATTTTTT TGAAGTATTT
GTGGTAAATT ATCTAACTAT TCGTCAGGAA ATGTTGGCAG GTGCTAAAAA TGAGATGTAT
TACTACAAGA AAGAAAAAAA ACGTTTGTTT AATGAATTTT TGTTAGGAAA TATATATAGA
TTTTATTTCA AAAAAGATAT AGGGAGATAT AAAGTAGAAG GTGGTTGGAA AATCTTATTC
CAGTACTTTG GAGGAAATTT CTATTTCTAT AAAGGAATAC TGAAATTGAC AATTAAGAGA
TTATTACCCC CTCAAATTAT ACAAAGAATA AAGAAGATGT TGTCATAG
 
Protein sequence
MNQHKKILSI CIPTYNRAKI LDNALNAIQK ELKTIDCSKI ELIVSDNCSP DNTEEVVENY 
IQAGMPIVYS KNHTNLGMDG NFVQCFKKAS AQYVWVLGDD DFLKEGALSF LLASLKNTNY
GLIHLKIFPK GNEEIQIYQT IEDYLSDISY WITFISSNIV ATKFVPLINF EKYMGTWFTL
IPLYITAAKE SSKNLMINKR IFEDAADGAT NGGYNFFEVF VVNYLTIRQE MLAGAKNEMY
YYKKEKKRLF NEFLLGNIYR FYFKKDIGRY KVEGGWKILF QYFGGNFYFY KGILKLTIKR
LLPPQIIQRI KKMLS