| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0684 |
|---|
| Symbol | |
|---|
| ID | 8367101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 837720 |
|---|
| End bp | 839306 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644983111 |
|---|
| Product | DNA methylase N-4/N-6 domain protein |
|---|
| Protein accession | YP_003140803 |
|---|
| Protein GI | 256819524 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAATA CAAATCAATA CTTTACATTG CAACAAGCCT CATTGTGGGC AACGGAATAT
ATGGGGAAGA ATGTTACTTC CTCAAATATC TCCTATTTAG TACAGTATGG TAAAGTAAAG
AAATTTGAAA ACAATGGCAT CACTCAAATC GCTAAAGAGG AACTTAAAGC CTATTACGAT
GCTTTGGGTG GAAATCGCGC CTCACAGTGG AAAGAGAAAT TAGGCGATGA CCTCAATTGG
AGTCTGTCGT TTGAGCAATA TAAAGAAGCA GAAACTACTA AGCACGTACA CCGCTTGCAC
CCTTACAAGG GGAAGTTTAT TCCGCAATTG GTAGAGTATT TTTTAGATGG GCATACTGAT
GCTTTCAAAA AAGAAGTCTT TTTTAAAGCA GGTGATATAG TCCTCGACCC TTTTTCGGGT
AGTGGTACTA CTATGGTACA AGCCTCAGAA TTAGGAATGC ACGCTATAGG GATAGACGTA
TCAGCTTTCA ATGCTCTCAT AGGCAATGCT AAAGTAGGGC ATTACGATTT GGTAGATGTG
TATAACGAAA CGCACCGCAT TACCCAAGCT TTAAAGGAGT TTTTAGCAGA AAAACACATA
CTTGCTTTTG ATGCTGAACT TACCGAAGCG CTCAATAATT TCAATAAAGA GTTCTTCCCC
GTACCCGACT ATAAATACCG TTTGCAACGC AAGGAGATAG ACGGCAAAAT ATATGGTGCT
GAAAAAGAAC AACAGTTTTT ACCTATTTAT CAGGCACTTG TGGAAAAGTA TCACATTCAG
CTGAAACAAC CTAAAGCTGA CACTTTCTTA GACAAGTGGT ATATACAGCA CGTGCGCGAG
GAAATAGATT TTGTGTTTAA CCTTATTAAA CAGATTGCTA ATCTCGCTAC CAAGCGTATA
GTTACCCTCA TATTGAGCCG AACCATTCGC AGTTGTCGTG CCACTACTCA CGCCGATTTA
GCAACCCTGA TAGAGCCCAT AACTACCACT TACTATTGTG CTAAACACGG CAAGGTGTGC
AAACCACTTT TTTCGATATT GAAATGGTGG GAAACCTACA CCAAAGACAC TATCAAGCGT
TTGCAACAAT TTAAAGAATT GCGTACTAAT ACCTACCAAA AGTGTTTACA AGGCGACAGT
CGTACTATTG ACATCTTTGA GGCATTAGAG CATAAGAGCC CAGAGTTTGC CGCTTTAGCA
AAAAAGCAGA AGATTAAAGG CATTTTCTCA TCGCCCCCTT ATGTAGGGCT GATTGATTAT
CACGAGCAAC ACGCTTATGC TTACGACCTT TTTGGTTTTG AGCGCAATGA CGATAAAGAG
ATAGGTCCCC TTTACAAAGG ACAAGGGCAG GAAGCCAAAC GTATGTATGT ATCGGGTATT
GCTGAGGTAC TTACCAATAG CAAACGCTTT TTAGCCGATG ATTACGATGT ATTTTTGGTA
GCCAACGACA AGTACGGCTT ATACCCCGAA ATAGCCGAGC GAGCAGGAAT GCGCATTGTA
AATCAATACA AACGCCCTGT ACTCAACCGT ACCGAAAAAG ACAAAAATGC GTACGCTGAG
ATTATATTTC ATTTAAAAGA GAAATAG
|
|---|
| Protein sequence | MLNTNQYFTL QQASLWATEY MGKNVTSSNI SYLVQYGKVK KFENNGITQI AKEELKAYYD
ALGGNRASQW KEKLGDDLNW SLSFEQYKEA ETTKHVHRLH PYKGKFIPQL VEYFLDGHTD
AFKKEVFFKA GDIVLDPFSG SGTTMVQASE LGMHAIGIDV SAFNALIGNA KVGHYDLVDV
YNETHRITQA LKEFLAEKHI LAFDAELTEA LNNFNKEFFP VPDYKYRLQR KEIDGKIYGA
EKEQQFLPIY QALVEKYHIQ LKQPKADTFL DKWYIQHVRE EIDFVFNLIK QIANLATKRI
VTLILSRTIR SCRATTHADL ATLIEPITTT YYCAKHGKVC KPLFSILKWW ETYTKDTIKR
LQQFKELRTN TYQKCLQGDS RTIDIFEALE HKSPEFAALA KKQKIKGIFS SPPYVGLIDY
HEQHAYAYDL FGFERNDDKE IGPLYKGQGQ EAKRMYVSGI AEVLTNSKRF LADDYDVFLV
ANDKYGLYPE IAERAGMRIV NQYKRPVLNR TEKDKNAYAE IIFHLKEK
|
|---|
| |