Gene Coch_0610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0610 
Symbol 
ID8367027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp764506 
End bp765843 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content46% 
IMG OID644983037 
Productdihydroorotase 
Protein accessionYP_003140729 
Protein GI256819450 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID[TIGR00857] dihydroorotase, multifunctional complex type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCC TCATCAAAAA CGCAATCATC GTAAACGAAA ATACCCTCTT TCAAGGCGAC 
CTCCTGATTG AGGGAGAGCG CATTGCCCAA ATAGGTACTC ACATCACTCC CAAAGGGAAT
TATGAGGTGG TGGAAGCCGA AGGCAAATAC CTCCTTCCTG GGGTGATTGA CGATCAAGTG
CATTTCCGCG AACCTGGGCT TACTCACAAA GCTACTATCG CTACCGAAAG CCGTGCTGCG
TTAGCAGGGG GCGTAACTAC CTTTTTTGAG CAACCTAACA CCGTACCTCA AACCATAACA
ATTCCGCTTT TGGAAGAGAA ATTTGCGATT GCCAAACAAT CATCATTTGC AAACTATTCT
TTCTTCTTAG GGGGTACAAA CGACAACCTC GAAGAACTGA AACGCTTAGA TAAAAATGCT
TGTGCAGGGG TGAAACTTTT CTTAGGCTCT TCTACGGGGA ATATGCTCGT AGACAACGAG
AAAACCATAG AAGCTATTTT CAATAATGTC GATTTAGTAA TTGCTGCCCA TTGCGAAGAT
GAAGCGACTA TTCGCAAGAA CTTAGCCCAC TATCAAGAAT TGTACGGCGA GGATATCCCT
ATTGCGATGC ACCCTCATAT TCGCAGTGCT GAGGCTTGCT ATCTGTCCTC TTCACGTGCT
ATTGCTTTAG CTGAAAAAAC GGGCGCACGC CTCCACGTGT TCCACCTTTC TACGGCTAAA
GAAACCGAAC TCTTCCGCAA TGATATTCCG CTAAAGGACA AGAAAATCAC CGCTGAGGTA
TGTGTGCATC ACTTGTGGTT TACTGATGAA GACTATACTA CTCGTGGAGC TTTCATCAAA
TGGAATCCTG CGGTAAAAAC TGCCGATGAC CGTACTGCGC TGTGGCAAGC CCTTTTAGAC
GACCGTCTCG ATGTGATTGC TACCGATCAC GCTCCTCATA CCCTCGAAGA AAAACAGCGC
AAGGGCTATC TGAATATCCC TTCGGGGGCG CCTTTAGTGC AACACTCGCT CGTGACAATG
CTCGAAAAAG CTTACAAAGG CACCATTTCT ATCAAAAAGA TAGTAGAGAA AATGTGTCAT
AATCCCGCAA TCCTTTTTCA GGTAAAAGAC CGCGGTTTCT TACGCGAAGG GTATTACGCC
GACCTTGTTT TGGTGGATAT GGATACACAG TGGACGGTAC AAAAAAACAA CCTGCTCTAC
AAGTGTGGAT GGAGTCCGCT CGAAGGGCAA CAATTTCACT CGGCTGTAGT GAGTACCTTC
GTAAATGGCA AAGAGGTGTA CCACAATGGC AAGGTAATTG CAGAGCCTCA GGGGCAACGC
ATCACTTTTA ACAGATAA
 
Protein sequence
MKTLIKNAII VNENTLFQGD LLIEGERIAQ IGTHITPKGN YEVVEAEGKY LLPGVIDDQV 
HFREPGLTHK ATIATESRAA LAGGVTTFFE QPNTVPQTIT IPLLEEKFAI AKQSSFANYS
FFLGGTNDNL EELKRLDKNA CAGVKLFLGS STGNMLVDNE KTIEAIFNNV DLVIAAHCED
EATIRKNLAH YQELYGEDIP IAMHPHIRSA EACYLSSSRA IALAEKTGAR LHVFHLSTAK
ETELFRNDIP LKDKKITAEV CVHHLWFTDE DYTTRGAFIK WNPAVKTADD RTALWQALLD
DRLDVIATDH APHTLEEKQR KGYLNIPSGA PLVQHSLVTM LEKAYKGTIS IKKIVEKMCH
NPAILFQVKD RGFLREGYYA DLVLVDMDTQ WTVQKNNLLY KCGWSPLEGQ QFHSAVVSTF
VNGKEVYHNG KVIAEPQGQR ITFNR