Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_0588 |
Symbol | |
ID | 8367005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 737982 |
End bp | 739565 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644983015 |
Product | Eco57I restriction endonuclease |
Protein accession | YP_003140707 |
Protein GI | 256819428 |
COG category | [V] Defense mechanisms |
COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.274467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCCCT CTCAGAAGAA AAATAGTAAG AATAAATATG GTCAGTACTT TACTCCTAAA GTAGTGGCTG ACTTTATGGT GGGCTTAGCT AACATTTCCC CTAATACCAA AGTGTTGGAG CCTGCTTGTG GTGAAGGTGT ATTTTTATCG CTTTTACAAG AAAAAGGTAT AAAAAATATT ACAGCTTTTG AGATAGATAC AGCATTAGCT CACTCATTCC ATTTTGTACG TCATGAAAGT TTTGTGTCAG CTCATCTTAC TGAAAAGTAT GATTTGATAA TAGGAAATCC TCCTTATATC CGTTGGAAAA ACTTGGAAGA AGAACTAAAA ATAGAATTAT CACAAAGCTC TCTTTGGAAT AAATACTGCA ATTCACTCTG TGACTATCTT TATATCTTTA TTCTCAAATC AATAGAGTTA CTTAACGAAG GAGGACAGCT TATCTTTATT TGTCCAGAGT ATTGGTTGAA TACCACTCAC TCCCTATCTT TGCGTAATGA GATGATGAAC CACGGCTATT TTGAAGAATT GTATCACTTC AACGAAACAC CTATCTTTGA AGGTGTAACA GTTTCTGTTA TTATTTTTAA ATACATAAAG AGCAAACATA GAAAAAATGT TATAAAAGTA TCTAAATATC ACAGCAAACA AAAATTAACA ACTGAGAAAC TTTTTAATTT ACAATATCAA ATTCCTTTTG AAAATGCTGA ATATATAAAA GTGCCTCAAT TTGATCTCAA TGAACGTTGG CTTTTAGAAA GTAAAGAGGT ACAAGCAGAG TTACGAACTT TAGAATTAGC CTGTGAAAAA GAATTTGCTG ACTTATTGTT TAATGAGAAA ACTCAATATC ACACTTTAGG TGAATACTGT GATATTGGCA ACGGGTTAGT GAGTGGGTTG GATAAGGCTT TTCAAGTAAA TGGTCACTCT CTAAACAAAG CAGAGCAATC AGCAACTATC AAAGTAGTAA AAGCTAAAGA TATAACACCT TTCTTAGCTG AAGTTATTAC AAGATACATC TATATTGAGG AAGGGCTTAC GGAAGAGCGT TTTAAAGAAC TTTATCCCAG TTACTATTTA CATTTTCAAC CCTATAAAGT GAACTTACAG CAACGTTACC AATACAATCG CAAAATTAAC TATTGGGAAT GGGTTTTTCT TAGGAACTTT CATTTGTTTA GTAAACCTGA AAGTCGAATT TTTGTGCCTT GTAAAGAAAG AATTTCTAAT AAGAATTATT TTCGTTTTGC CTTAGTAGCA CAAGACATCT ATCCCACTCA AGATGTAACG GCTATTTTTA AAAAACAACA CACACAAGAA AGTATAGAAT ATATTTTAGC TTATCTCAAT CAGCCTATTA TATTTGATTG GCTCAAGAGT AATGGGGTAG TAAAAGGTAG TATTGTAGAG TTTTCAGAAA AACCTATTGC AAGTATTCCG TTTAGGAAAA TTGACTGGAA TAATGAAAAA GAAGTACAAC AACATCATAT CATCACCGAT GTTACTAAAC AATATCTAAA AACTAAAAAC AGCTTACAAC TTACCCACAT TAAAACATTG TTTAACCAAC TCTTAAATAT CTAA
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Protein sequence | MTPSQKKNSK NKYGQYFTPK VVADFMVGLA NISPNTKVLE PACGEGVFLS LLQEKGIKNI TAFEIDTALA HSFHFVRHES FVSAHLTEKY DLIIGNPPYI RWKNLEEELK IELSQSSLWN KYCNSLCDYL YIFILKSIEL LNEGGQLIFI CPEYWLNTTH SLSLRNEMMN HGYFEELYHF NETPIFEGVT VSVIIFKYIK SKHRKNVIKV SKYHSKQKLT TEKLFNLQYQ IPFENAEYIK VPQFDLNERW LLESKEVQAE LRTLELACEK EFADLLFNEK TQYHTLGEYC DIGNGLVSGL DKAFQVNGHS LNKAEQSATI KVVKAKDITP FLAEVITRYI YIEEGLTEER FKELYPSYYL HFQPYKVNLQ QRYQYNRKIN YWEWVFLRNF HLFSKPESRI FVPCKERISN KNYFRFALVA QDIYPTQDVT AIFKKQHTQE SIEYILAYLN QPIIFDWLKS NGVVKGSIVE FSEKPIASIP FRKIDWNNEK EVQQHHIITD VTKQYLKTKN SLQLTHIKTL FNQLLNI
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