| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0551 |
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| Symbol | |
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| ID | 8366963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 688291 |
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| End bp | 691296 |
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| Gene Length | 3006 bp |
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| Protein Length | 1001 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644982973 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003140670 |
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| Protein GI | 256819391 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.874554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CACTTTTTTC AGTGCTCTCA CTGATGGCGT TTAGCCCTCT GTTATGGGCA
CAAGAAACTG AAATGATTAC CCATCCACAA AGCCAATACC AAAAGGCAGT GGAACTCTAC
AATCGCAAGC TCTATCAGCC TGCACAGAAC CTGTTCCGAA AAGAACAAAC CTCCAATCCC
GATAGAGCTA TCCAAACCCA AAGTGAATAT TACGTAGCCA CTATTGCCGC TATCCTTAAT
CAAGACGGAG CCGATGCGCT GGTGAATAAC TTTATCGTTA ATCACCCCGA CTCTCCTCTG
AGCTCCGAAG CCTATTTGCA AATGGCTAAC ATCTATTATC AGCAGGGCAA CTACGAAGAT
GCGCTCGCTT GGTACGAGGC TATCGACGAC CAAAGCATAA GCAGTAGCGA TAAAGCTAAA
TACAACTTCC AAAAAGGTTT TTGCCTCTTC CAAACCGGCA AACAAGCCGA ATCTAAACCT
TATTTCGAGT CGGTACAAAA CACCAAAGAA TACGGTGCCA ATGCCAAGTA TTACTTAGGA
TATATCGCCT ATGATAAAGA CGATTATTCT AAGGCTGAAA GCTACTTCCG CGAAGTACAA
GAAGAAGATG CTTCACTCAC CAAAAACGTG TCTTACTTCC AAGCCAATAT GTACTTCAAA
CAAGCTCTTT ATCAAGAAGC TATCACCGAA GGACAGAAAC AGCTCGCTAA AACCAAAAAT
GCTCAAGAAG TATCTGAGCT CAATAAGATT ATAGGCGAAA GCTACTTCAA CCTCAAGAAA
TACAAAGAAG CAATCCCTTA CTTACAAAAC TATAAAGGTA AAAAAGGTAG GTTCTCCAAT
ACCGATTATT ACTATATCGG ATACGCTTAT TACAAAAATA ACGATTATAA AGCGGCTATC
GAGCAGTTCA ACAAAATCGT AGGCGGAAAC GATAGCGTCG CTCAAAATGC GTATTATCAT
TTAGCCGAAT GCTATTTGAA AACCAACCAA AAACAAGAGG CGCTTAACGC TTTCCGCAAT
GCCTCTCAAA TGGACTTCGA TAAGCAAATT AAAAAAGATG CTCATCTGAA CTACGCCCGC
CTCAGTTATG AAATCGGTAA CCCTTACGAG AGTGTCCCCA ACGTGCTACA AGCATACGCT
TCGGCTTATC CTAACGACCA TAAAGACGAA ATACAGTCGC TCTTAGTCGA TTCTTATATT
TCATCTGGTA ACTATCAAGC CGCTATCAGT CTGCTCGAAA AGTCTAACGA CCCTAAGGAC
AAAGAAACCT ATAAAAAAGT AGCCTTCTAT CGCGGGTTAG AGCTTTTTAA TGAATTGCAA
TACAACGAGG CTTTAAAATA TTTGCAGAAA GCCATCGGTG GTAATTCTGC ACTTGCCGCT
CGCGCTACCT ATTGGGCTGG TGAAACTGCT TATCAGCTGA AAGATTACAA AGGTGCCGAA
TCCTATTTTA CTCAGTTTCT CCATAATTCA TCAGCTCCTA AAACCGAAGA GTATGCCAAA
GGCTTCTACG GTTTAGCTTA TGCTAATTTC AATCAAAAAA ACTATGCAGG TGCTATCGCT
AATTTCGAGA AGTACCTCAA ACAAAACCCT AAGAACAGTA GTTGGAAACA CGACGCTATA
CTCCGTCTCG CCGATTCTTA CTTCGTAACA GGTAAATACT GGCCTGCAAT GGAAGGGTAT
AACAAACTCA TCGAAGCTAA ATCTTCTGAC CAAGATTATG CCGCCTACCA AAAGGCTATT
AGTTATGGGT TCGTAGACCG CCTCAATAGC AAAATTGAAG ACTTAGAGCG TTTCGTTAAG
AACTACAAAA GCTCTAATCT GCGCCCTAAT GCTTTGTTTG AATTAGGAAA TGCTTATGTA
ACCAAAGGAA ATACCCAAAA AGGATTACAG TACTATCAGC AACTCGCCAA AGAGTATAAA
GGCAATGTGC TCGTACCTCG TGCAATGCTC CGCGAAGGTT TAGTGTATTA TAATAGGAAC
GAAAACCAAA AAGCCTTAAC GCTTTTCCAA ACTATCGCCA AAGACTATCC TAATACCAAC
GAAGCCTCAC AAGCGGTAGC TTCCGCAAAA CTCATCTATG TAGATATGGG TAACGTAAAC
GAATACGCAT CGTGGGCTAA AGGTTTGGGA TATGTAGAGG TAACCGACCT CGAACTCGAA
GGAGCTACTT ATGAAGCTGC CGAACGACAA TATATGCAAA ACAATACCAA AGAGGCTATT
TCAGGTTTTG AAAAATACCT TAAAGAGTTC CCTAACGGTA TGCGTCGCAC CAATGCCGAG
TTTTTCTTAG CACAAATGTA TTTCAATAGT GGACAAAAGG CTAAAGCACT TACACATTAC
GAAAATGTAA CCAAAAGCGG TTCTAATGAA TACGGCGAGC AATCGCTTAC TCGTGTGTGT
CAAATCCTTC TTGAAGCAGG TAGCTACCTA AAAGCTAAAC CTTATCTCGA AGACCTCGAA
CGAACCGCTA CTATCGCACA GAACAAAACT TATGCACAAA GCAACCTAAT GCGCGTGTGC
TATAACGAAA AACTATACGA TAAAGCTATT GAATATGCCA ATAAGGTATT AGAAGAAAAA
TCTATCGATA CACGTATCAA GAACGATGCT TATATAGTGT TGGCTCGTGC TTATAGTCAA
GCAGGAAATG AAACCCAAGC TCGCAAATAT TACCAAGAGG TACAGAAAAC CGCTACGGGT
AGCCTCGCTG CCGAAGCCTT GTATTACGAC GCTTATTTTA AGAATAAAGA CGGTAACTAC
AAAGCCTCTA ATGACGTAGT TCAAAAGATT GCTAAAGACT ATGGCGGACA CAAAGAGTTC
GCTGCTAAGA GCCTTATCGT AATGGCTAAA AACTTCTACG GACTCAAAGA CGCTTATCAA
GCCTCTTACG TCTTAGAAAG TGTAATTAAA AACTTTAAAG AGTTTCCTGA AATAGTAGCC
GAAGCCAAAA AAGAACTCGC AGTAGTAAAA GCCGAAGCCG CTAAAAGTAA TTCATCAGTA
AAATAA
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| Protein sequence | MKKTLFSVLS LMAFSPLLWA QETEMITHPQ SQYQKAVELY NRKLYQPAQN LFRKEQTSNP
DRAIQTQSEY YVATIAAILN QDGADALVNN FIVNHPDSPL SSEAYLQMAN IYYQQGNYED
ALAWYEAIDD QSISSSDKAK YNFQKGFCLF QTGKQAESKP YFESVQNTKE YGANAKYYLG
YIAYDKDDYS KAESYFREVQ EEDASLTKNV SYFQANMYFK QALYQEAITE GQKQLAKTKN
AQEVSELNKI IGESYFNLKK YKEAIPYLQN YKGKKGRFSN TDYYYIGYAY YKNNDYKAAI
EQFNKIVGGN DSVAQNAYYH LAECYLKTNQ KQEALNAFRN ASQMDFDKQI KKDAHLNYAR
LSYEIGNPYE SVPNVLQAYA SAYPNDHKDE IQSLLVDSYI SSGNYQAAIS LLEKSNDPKD
KETYKKVAFY RGLELFNELQ YNEALKYLQK AIGGNSALAA RATYWAGETA YQLKDYKGAE
SYFTQFLHNS SAPKTEEYAK GFYGLAYANF NQKNYAGAIA NFEKYLKQNP KNSSWKHDAI
LRLADSYFVT GKYWPAMEGY NKLIEAKSSD QDYAAYQKAI SYGFVDRLNS KIEDLERFVK
NYKSSNLRPN ALFELGNAYV TKGNTQKGLQ YYQQLAKEYK GNVLVPRAML REGLVYYNRN
ENQKALTLFQ TIAKDYPNTN EASQAVASAK LIYVDMGNVN EYASWAKGLG YVEVTDLELE
GATYEAAERQ YMQNNTKEAI SGFEKYLKEF PNGMRRTNAE FFLAQMYFNS GQKAKALTHY
ENVTKSGSNE YGEQSLTRVC QILLEAGSYL KAKPYLEDLE RTATIAQNKT YAQSNLMRVC
YNEKLYDKAI EYANKVLEEK SIDTRIKNDA YIVLARAYSQ AGNETQARKY YQEVQKTATG
SLAAEALYYD AYFKNKDGNY KASNDVVQKI AKDYGGHKEF AAKSLIVMAK NFYGLKDAYQ
ASYVLESVIK NFKEFPEIVA EAKKELAVVK AEAAKSNSSV K
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