Gene Coch_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0548 
Symbol 
ID8366960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp685079 
End bp685969 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content45% 
IMG OID644982970 
Productdialkylrecorsinol condensing enzyme DarA 
Protein accessionYP_003140667 
Protein GI256819388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.339602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCG TATTGGTAGT ATATTACACC CAATCGGGGC AACTCAAAGA GATTATCGAT 
AGTGTACTAT CCCCACTCAC GGAGGTAACT ATCGACTTTT TGCCTATTGA TACGGCAGAA
CCTTTTCCTT TTCCGTGGAC AGACGAGGCG TTTTTTGGAG CTTTCCCAGA GTCGTATTTG
CAAATACCCC AGCCCTTAAA GCCTTTTCAG CTGGCACATA CCGATTACGA TTTGGTGATA
TTAGGCTACC AAGTGTGGTA TTTGTCGCCT TCTATTCCGT TTAATTCCTT TTTGCAGAGT
GAAGCAGGTA AGCAACTGTT ACGAGGCAAA CCTGTAATTA CTGTGTCGGG TAGCCGCAAT
ATGTGGGTAA TGGCACACCA GAAAGTAAAA AAACTCTTAA CCGACTGTGG GGCGCACTTA
GTGGGCAATA TTGCCCTTAC CGATAGGCAC CACAATCATA TCAGCGTGAT TACCATTGTA
CAGTGGCTCT TTTCGGGCGA CAAGAACAAA CGCTATCTCG GTGTGTTCCC CAAAGCGGGC
GTTGCCGATA AAGACATACA AGGCGCGAGC GTATATGGTA CGCTCATTGC CCCTCACCTG
CAAACAGGTG ATTACACAGG ATTGCAACAA GAAATAGTAG CCCACGGAGG TGTGCATTAC
AAGCGTTTTC TCCTTTCGGC AGAGAAGAAA GGCAACCGCC TTTTCGGCAT CTGGGCAAAG
ATGATTTACG GCAGTAAGAA ACGCAAATTC CTGCTGAAAT GCTTCCGTAT CTATCTGTAT
ATCGCTATTT GGGTGCTAAT GCCCATAGTA TGGCTACTGT ATTGGCTCAC TTATCCATTG
TTCTTTTGGA AAGTAGAGAG AGAGGTGAAA CAATTGATAA TTGAGAATTG A
 
Protein sequence
MKRVLVVYYT QSGQLKEIID SVLSPLTEVT IDFLPIDTAE PFPFPWTDEA FFGAFPESYL 
QIPQPLKPFQ LAHTDYDLVI LGYQVWYLSP SIPFNSFLQS EAGKQLLRGK PVITVSGSRN
MWVMAHQKVK KLLTDCGAHL VGNIALTDRH HNHISVITIV QWLFSGDKNK RYLGVFPKAG
VADKDIQGAS VYGTLIAPHL QTGDYTGLQQ EIVAHGGVHY KRFLLSAEKK GNRLFGIWAK
MIYGSKKRKF LLKCFRIYLY IAIWVLMPIV WLLYWLTYPL FFWKVEREVK QLIIEN