| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0538 |
|---|
| Symbol | |
|---|
| ID | 8366950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 674506 |
|---|
| End bp | 676071 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644982961 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003140658 |
|---|
| Protein GI | 256819379 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA TATATATAAT AATCGCTATA GTAGCCTTAC TATCTATTGC TTGTAGTAAG
GACTCTCTTA AACTACAGAA TCCTAATGAA CCTGGTTTGG AAAATCTTGA AACAGAAGAA
GGTATCCAAA AATTTGCCTT AGGGGTGTAT GCTCCAATGA GAGGAGGGGT TAATTATTAC
GCTTGGTTTG CGCTTACCCT TCATAATTTG ATGGGAGATG CTACAACTGC TGTCGCTCTT
AATTTTGGAT TCTGTTATAG TAACCAAATA TTTAGCATTA CACGTCCCGA TGGCTCTGTT
ATTAAATCTT CTTTGTTAGG AGAAAAAACT CAAGGAGCAG TGTTGAAACA ATTAAATATC
AGAGAAAATG GGAATGAAAA TGCTTTCAAT AATGAATGGA TGGCTATGTA TGGTGTATTA
GGACATTGTA ATTTAGCTCT TAAACTCCTT GATAATAATG AGGTGGTCTT TAGAGATAAC
GCTGAGGTAA AGAAAAAAAC CTACCAAGCT TGGTTCTTAT GGTGGAAGGC TTTTGCTTAC
TCTCGTATTG GTTCTCTTTA TGCAAAGGGA GTGATTACTA ATGAATACAA TGTGCTTAGC
AATAACTACC AATCACACGA AGCAATAATC ACTGAAGCCA ATCGTATCTT TGAAGAAGCA
AAAGCAATCT TAGCTACTAT TCCTGAGGGA GACACTACTT ATAGTGGTCT CATTGATACT
TTTATTCCTT CTCAGTTTAA AGAAGGCAAT GGAGGGGTCA TTACTCCTAA GATGTTTATC
CGCAATATCA ATACCTATAT AGCACGTAAT CTTTTGGTAA ACAAATATGC TTCAGAGCTT
ACTTCATCTG AATTATCACA GATAGAAACC TTAGTTAATA GTGGTATCCA GCAAGGAGAT
AAGATTTTTA TAATGCGATC TATCACACCT AGCAGTTTGT GTTTTGTAAG TGAAACCGCT
TGGACTCCTT ATAGGATTCT CGTAGGATGG GAATACCTTT CAGAGCGTTT AGTACAAGAT
TTTAAGGCTG GAGATAATCG CTATACCCGA AATGTACTAA GAAGAAGTAG TGCTCTTTTT
AACCCTCGAA ATCGTGGTTA TGGTATAGGT ACTCGCTACA CCCTTAAAGA TGGTGGTGAT
TACGCAAGTA CTAGCGCTGG TGTTGTAGAA TTGCCTTTTG CAGGTACTTA TGAAGAAAAC
CAATTAATGC TCGCTGAAGT AAAAATCAGA AATAACAATA TTGATGGTGG TCTGGCTCAC
ATAGATGCAG TGCGTACTTA CCAAAAAGCT GGACTTACAG CTGTGACAGG TACAGGCTTA
ACCAAGGAAC AAGCTCTTGA AGAACTCCGC AAAGAACGTC GTATAGGCTT GTTCCTTAAA
GGGACTTCTT TCTATGATGC ACGTCGTTGG GGCATTCTCA AACCCGTAGC TCAAGGAGGA
GGTCGTACCA ATGCCAATGT AGTAGTCGCC ACCGATGGTA CTACCGAGGC TTGTACAATA
GACTATCAAT ACTTAGAGTG GTTTGATGTT CCTGCAAGTG AAACTGATTT TAACCCTCTA
CCCTAA
|
|---|
| Protein sequence | MKKIYIIIAI VALLSIACSK DSLKLQNPNE PGLENLETEE GIQKFALGVY APMRGGVNYY
AWFALTLHNL MGDATTAVAL NFGFCYSNQI FSITRPDGSV IKSSLLGEKT QGAVLKQLNI
RENGNENAFN NEWMAMYGVL GHCNLALKLL DNNEVVFRDN AEVKKKTYQA WFLWWKAFAY
SRIGSLYAKG VITNEYNVLS NNYQSHEAII TEANRIFEEA KAILATIPEG DTTYSGLIDT
FIPSQFKEGN GGVITPKMFI RNINTYIARN LLVNKYASEL TSSELSQIET LVNSGIQQGD
KIFIMRSITP SSLCFVSETA WTPYRILVGW EYLSERLVQD FKAGDNRYTR NVLRRSSALF
NPRNRGYGIG TRYTLKDGGD YASTSAGVVE LPFAGTYEEN QLMLAEVKIR NNNIDGGLAH
IDAVRTYQKA GLTAVTGTGL TKEQALEELR KERRIGLFLK GTSFYDARRW GILKPVAQGG
GRTNANVVVA TDGTTEACTI DYQYLEWFDV PASETDFNPL P
|
|---|
| |