| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0505 |
|---|
| Symbol | |
|---|
| ID | 8366916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 640029 |
|---|
| End bp | 640859 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644982929 |
|---|
| Product | naphthoate synthase |
|---|
| Protein accession | YP_003140627 |
|---|
| Protein GI | 256819348 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0447] Dihydroxynaphthoic acid synthase |
|---|
| TIGRFAM ID | [TIGR01929] naphthoate synthase (dihydroxynaphthoic acid synthetase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0636715 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGGA CAACCGTAAA AGAATACGAA GATATTACGT ATAAAAAATG TGACGGCGTA
GCGCGTATCG CCTTTAACCG TCCCGAAGTG CGCAATGCTT TTCGCCCTAA AACTACCGCC
GAACTGCTCG ACGCGTTCAA AGATGCCTAT GAAGATATCA ACATAGGCGC CGTTTTACTT
TCTGCCGAAG GTCCCTCTCC CAAAGATGGC GTATGGAGTT TTTGCAGTGG TGGCGACCAA
AAAGCGCGTG GTCATCAGGG GTATGTAGGC GACGATGGCT ACCACCGTCT CAATATCCTC
GAAGTGCAAC GCCTTATTCG CTTTATGCCC AAAGTGGTGA TAGCAGTTGT GCCCGGTTGG
GCAGTAGGGG GCGGACACTC ATTGCACGTG GTATGCGATC TTACCCTTGC CAGCAAAGAA
CACGCTATTT TCAAACAAAC CGATGCCGAT GTAACGAGTT TTGATGCTGG TTATGGGTCG
GCTTATCTCG CCAAAATGGT CGGACAGAAG AAAGCCCGCG AAATCTTCTT CTTGGGGCGC
AACTATTCTG CTCAAGAGGC TTTCGAGATG GGAATGGTAA ACGCCGTAGT CCCTCACGAC
GAGCTCGAAG CTACCGCTTT TGAGTGGGCG CAAGAGATAA TGGCTAAATC GCCTACCTCT
ATCAAAATGC TGAAATTCGC TATGAACCTC ACCGATGACG GTATGGTTGG GCAACAAGTA
TTCGCAGGTG AAGCCACCCG TTTAGCATAT ATGACCGATG AAGCCAAAGA AGGACGCGAT
GCCTTCCTCG AAAAACGCAA ACCTAACTTC GAAAAGAAAT GGATTCCTTA A
|
|---|
| Protein sequence | MNWTTVKEYE DITYKKCDGV ARIAFNRPEV RNAFRPKTTA ELLDAFKDAY EDINIGAVLL
SAEGPSPKDG VWSFCSGGDQ KARGHQGYVG DDGYHRLNIL EVQRLIRFMP KVVIAVVPGW
AVGGGHSLHV VCDLTLASKE HAIFKQTDAD VTSFDAGYGS AYLAKMVGQK KAREIFFLGR
NYSAQEAFEM GMVNAVVPHD ELEATAFEWA QEIMAKSPTS IKMLKFAMNL TDDGMVGQQV
FAGEATRLAY MTDEAKEGRD AFLEKRKPNF EKKWIP
|
|---|
| |