| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0447 |
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| Symbol | |
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| ID | 8366853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 570106 |
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| End bp | 572310 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644982868 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003140571 |
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| Protein GI | 256819292 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAATA TGAAAAATAT AAAAACTTTA TTGCTTTGGT GTGTTGTCGG TACACTCTCA
GCCCAGCAAA CGCCGGTTTA TTTAGATGCT TCACAACCCA TTGAGAAGCG CATAGACGAT
GCCCTCTCGC GGATGACCTT AGAGGAAAAA GTAGCTATGT GCCACGCTCA ATCTAAGTTC
AGTTCACCTG GAGTGCCCCG TTTGGGTATT CCCGAAAACT GGATGACCGA TGGTCCTCAC
GGCATACGCC CCGAAGTACT CTGGGACGAG TGGAATCAAG CAGGATGGAC AAACGATAAA
TGCACCGCTT TCCCCGCCCT CACTTGCCTT GCTGCCACGT GGAATCCCGC TCTCAGCAAA
GCCTACGGAA AAGCCATAGG CGAAGAAGCC CGCTATCGTA ACAAGAATGT ACTCTTAGGT
CCTGGGGTGA ACATCTACCG TACCCCCCTC AACGGACGCA ATTTCGAGTA TATGGGCGAA
GACCCTTATT TGGCATCCAA AATGGTCGTG CCTTATGTGC AAGGTGTTCA AGCCAATGGT
GTGGCTGCTT GTGTGAAGCA TTATGCGCTT AACAATCAAG AAATCAACCG CCATACAGTG
AATGTAAAGG TAGACGACCG CGCCCTGTAT GAGATTTACC TCCCCGCCTT CAAAGCCGCT
GTGCAAGAGG GAAAAGCGTG GAGTATAATG GGGTCTTATA ACAAATACAA AGACCAATGG
GCTTGCCAAA ACCAATACTT ATTGCAAGAT ATCTTGCGCA AAGAATGGGG CTTTGACGGT
GCCGTAGTAT CCGATTGGGG TGGAGTGAAC AACACCGATG GCGCTGCTCT CCACGGATTG
GATATGGAAT TTGGTACTTG GACTGATGGA ATGGTCGAAA ACCGCTCGAA TGCTTACGAC
CATTACTTCC TTGCTCAACC CTTTCTCGAA AAACTGAAAT CAGGGGAAAT AAAAGAAGAA
GTTGTGAATG AAAAGGTGCG CAATATCCTC CGACTTGTAT TCCGCACCAA TATGGCAGCC
AATCGACCCT TTGGCTCATT TGCCTCACCA GAACACTTTG CCATAGCTCG CAAAATAGGG
CAAGAAGGTA TTGTGCTACT CAAAAACGAT AAAAATGTAT TGCCTATTGA CGTTAAAAAG
GTAAAAACCA TAGCCGTAAT AGGCGAGAAT GCTATCAAAA TGATGACCGT AGGTGGAGGA
AGTTCCTCAC TGAAAGCCGT TCACGAGATA CTCCCCTTAG ACGGAATTAA AAACCGCATA
GGCAATACAG CCAAAGTGCT CTATGCACGT GGCTATGCCA GCGATGATTA CAAAGACCAA
GATGGGCTTG CTGCCAACGA CATCACCGAC AAACGTCCGG CGCAAGAACT CCTTGCCGAA
GCTGTAAAAA CCGCTCAACA AGCCGATGTA GTTATCTTTA TAGGAGGACT CAACAAACAC
GATGGTCAGG ATTGTGAGGG TAACGACCGC AAACAATACG GCTTACCTTA CGGACAAGAT
GCCGTGATTG AAGCTTTGGC AAAAGCCAAT AAAAACTTGG CAGTAGTGCT CATTTCGGGA
AATGCAATGG CAATGCCTTG GGTGAAAAGC GTACCTGCGA TTATACAAGA TTGGTATTTA
GGATCCGAAG CAGGTAACTC CCTCGCCGAT GTACTCTTCG GTGATGTGAA CCCCTCAGGG
AAATTGCCTT TCACTTTCCC AGTGCATTTG GAGGACAATG CAGCCATAGC CTTAGGTGAA
TACCCAGGGG ATAAAGAGGT TACCTACCAC GAAGACATTT TGGTAGGCTA CCGCTACGCC
GATACCAAAG GAGTAAAACC ACTATTCCCT TTCGGTCACG GACTCTCCTA TACTACCTTC
AAATATGGCA AACTCACTGC CAACAAGAAA ACTACCAATG GCGATATCAG CTTCTCGGTA
ACGGTACAGA ACACCGGCAA ACGTGATGGT GCTGAAGTGG TACAACTCTA TTTGCACGAC
GAAGAAGCCT CAGTATTACG TCCGTACAAA GAGCTCAAAG GTTTTGAGAA AGTATTCTTG
AAGGCAGGCG AAACTAAAAC CGTAACCTTC CACATCACCA AGCAAGACCT CTCTTTCTTC
TCTGCCAACC AACACGCTTG GGTAGCCGAA AAAGGAACTT TTAAAGCGTT AGTAGGCACC
TCTTCTGGCG ACATTAAAAG CACAGTAGAT TTCACCTTAG AATAA
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| Protein sequence | MTNMKNIKTL LLWCVVGTLS AQQTPVYLDA SQPIEKRIDD ALSRMTLEEK VAMCHAQSKF
SSPGVPRLGI PENWMTDGPH GIRPEVLWDE WNQAGWTNDK CTAFPALTCL AATWNPALSK
AYGKAIGEEA RYRNKNVLLG PGVNIYRTPL NGRNFEYMGE DPYLASKMVV PYVQGVQANG
VAACVKHYAL NNQEINRHTV NVKVDDRALY EIYLPAFKAA VQEGKAWSIM GSYNKYKDQW
ACQNQYLLQD ILRKEWGFDG AVVSDWGGVN NTDGAALHGL DMEFGTWTDG MVENRSNAYD
HYFLAQPFLE KLKSGEIKEE VVNEKVRNIL RLVFRTNMAA NRPFGSFASP EHFAIARKIG
QEGIVLLKND KNVLPIDVKK VKTIAVIGEN AIKMMTVGGG SSSLKAVHEI LPLDGIKNRI
GNTAKVLYAR GYASDDYKDQ DGLAANDITD KRPAQELLAE AVKTAQQADV VIFIGGLNKH
DGQDCEGNDR KQYGLPYGQD AVIEALAKAN KNLAVVLISG NAMAMPWVKS VPAIIQDWYL
GSEAGNSLAD VLFGDVNPSG KLPFTFPVHL EDNAAIALGE YPGDKEVTYH EDILVGYRYA
DTKGVKPLFP FGHGLSYTTF KYGKLTANKK TTNGDISFSV TVQNTGKRDG AEVVQLYLHD
EEASVLRPYK ELKGFEKVFL KAGETKTVTF HITKQDLSFF SANQHAWVAE KGTFKALVGT
SSGDIKSTVD FTLE
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