| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0441 |
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| Symbol | |
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| ID | 8366847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 558246 |
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| End bp | 560840 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644982862 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_003140565 |
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| Protein GI | 256819286 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGACA ATACACCTCA AAACACTACT CCACAAGGAG ATAGCATCAT TAAAGTCACA
GGTATGTACC AAGATTGGTT CTTGGATTAT GCTTCGTACG TAATCCTCGA ACGCGCTGTA
CCAGCAATCG AAGATGGCTT TAAGCCCGTA CAACGCCGTA TTATGCACTC GCTTAAAGAA
TTAGACGATG GTCGCTACAA CAAGGTGGCT AACGTCGTGG GGAATACAAT GCAGTATCAC
CCTCACGGCG ATGCGAGTAT AGGCGATGCT ATTGTACAAA TCGGTCAGAA GGACTTGCTC
ATCGATACGC AAGGTAACTG GGGGAATATC CTCACAGGCG ACGATGCAGC AGCACCTCGT
TATATCGAAG CTCGCCTTTC TAAGTTTGCC CTCGATGTGG TCTTTAGCCC TAAGGTAACC
GAATGGCAAT CCAGCTATGA TGGTCGTAAG AAAGAGCCTA TCAGTTTACC GGTGAAGTTT
CCGCTCCTCT TGGCACAAGG TACCGAGGGG ATAGCCGTGG GGCTTTCTAC CAAGATATTA
CCTCACAACT TCATCGAGCT TATCGAGGCT TCCATTGCTT ACCTCAAAAA TAAACCTTTT
GAATTATACC CCGATTTCCC TACTGCGGGT ATTATGGACG TAAGTGGCTA TAACGATGGG
GCAAGAGGTG GACGTGTGCG GGTGCGTGCC AAGATTTCGC AACTCGACAA GAGTACGCTT
TGCATCACCG AAATTCCGTT TACTACCACC ACTACCTCGC TCATCGACTC TATACTGAAA
GCCAACGAAA AAGGCAAGAT AAAAATCAAA AAGGTAGACG ATAACACAGC TGCCAATGTA
GAGATATTGG TGCACTTGCC CAACGGCACG TCGCCCGATA AGACTATCGA TGCACTCTAC
GCCTTCACTG CCTGCGAAAC AGCTATTTCG CCCATTACCT GTGTGATTGA GGACAACAAA
CCGCATTTTC TCACCGTCTC AGAAGTGTTG CGTCGCAGTA CCGACCGCAC AGTAAGTCTG
CTCAAACAAG AGCTCGAAAT TGAACTTTCT GAACTCGAAA TGCAATGGCA CAGTGCCTCG
CTCGAAAAGA TTTTCATCAG AGAAGAGATG TATATCGACT TCAAGAACTA CACCGATAGA
GAGAGTTTGT ACGAGTACTT GTACCAGCGT TTTGAACCTT TCAAAAAAGA TTTGATCCGT
GAGATTACCG ATGACGATTT GGCTAAACTC ACTCAAATAC CAATGATTCG CATCACCCGC
TTCGACTCTT ATAAGGCTGA TGAAAATATC CTCAAAATAG AAGCCGATAT CGAGGAAGTG
AAAAACCACC TTGCAAACCT TATCGACTAT GCGATTTCCC ATTTCGAACG CCTTAAAAAG
ACTTATGGTA AGGGGCGCGA ACGGAAAACC GAAATGCGCG TATTCGATAC CATCGAGGCG
ACCAAAGTAG TGGTGCGCAA TACCAAACTC TATGTGAACA GAGCTGAAGG TTTTGTAGGT
ACAGGCTTAC GCAAAGATGA GTATGTAGGT GATTGCAGTG ATATCGACGA TGTGATTGTA
TTTACCGAAA GCGGTGCGAT GTACGTTACC AAAGTATCCG ATAAACAATA TATAGAGAAA
AACATCATAC ACGTAGCGGT CTTTAAGAAA GACGACAAGC GCACCGTGTA CAATATGATT
TATAAGGATG GACAAACGGG CTTCTCCTAT ATCAAGCGTT TCAACGTTAC GGGTATTACC
CGCGATAAGA AATACGAGCT CATTCCTCAA CACAAAGAGT CGCGTGTGCT CTATTTCACA
GCCAACCCTA ATGGTGAAGC CGAAGTGGTA ACCGTGAACT TGCGTCAGTT AGGCACTTTG
CGTAAACTGC GATGGGATAT CGATTTTGCC GATACCCTCA TCAAAGGGCG GGGCGTGAAA
GGAAACCTCG TGAGCAAATA CGCTATCAAG CGCATCGAGC TAAAAGAAAA AGGCGTATCA
ACCCTCAAAC CGCGCAAGAT ATGGTTCGAC AATATTGTAA AACGCCTCAA CACCGAAGAG
CGCGGCACGC TACTCGGGGC TTTCAAAGGC GATGACCGTA TGCTTCTCAT TACCAAAGAG
GGCGTCGTGA AGACCATTAT CCCCGAATTG AGTCTGCATT TCGAGAACAA TATTGCCGTA
ATGGAGAAAT GGGTGCCCGA GAAACCTATT TCGGTAATTT ACTACGATGG AGAGAAAGAA
CGCGTGTTTG TAAAACGTTT TGTGGTAGAG AACGAAAACC GTGAAGAGTT AGTCATTACC
GAACATCCTA AATCGCAATT GCTCTTCGTC TCTGCCGATT GGCGACCTAT GGCTGAGGTA
GTCTTCACCA AAGAAAAAGG CAAGGAGAAA GAGAACCTCA TTGTGAATTT AGAAGAGTTC
ATCAGTGTAA AAGGCATCAA AGCCTTGGGC AACCAGCTCA CCACCGACAA GGTGAAAACT
GTCAACACTC TTGAATCTCT CCCCTACGAA GAACCCCAAG AAGAGGAACC CGTAGAAGAC
CTCGGCGATG AAGAAATTGT CCCTCCTCCC TCTGAAAATG AGAGCGACGG CACCCAAACA
GAATTAGAAT TTTAA
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| Protein sequence | MEDNTPQNTT PQGDSIIKVT GMYQDWFLDY ASYVILERAV PAIEDGFKPV QRRIMHSLKE
LDDGRYNKVA NVVGNTMQYH PHGDASIGDA IVQIGQKDLL IDTQGNWGNI LTGDDAAAPR
YIEARLSKFA LDVVFSPKVT EWQSSYDGRK KEPISLPVKF PLLLAQGTEG IAVGLSTKIL
PHNFIELIEA SIAYLKNKPF ELYPDFPTAG IMDVSGYNDG ARGGRVRVRA KISQLDKSTL
CITEIPFTTT TTSLIDSILK ANEKGKIKIK KVDDNTAANV EILVHLPNGT SPDKTIDALY
AFTACETAIS PITCVIEDNK PHFLTVSEVL RRSTDRTVSL LKQELEIELS ELEMQWHSAS
LEKIFIREEM YIDFKNYTDR ESLYEYLYQR FEPFKKDLIR EITDDDLAKL TQIPMIRITR
FDSYKADENI LKIEADIEEV KNHLANLIDY AISHFERLKK TYGKGRERKT EMRVFDTIEA
TKVVVRNTKL YVNRAEGFVG TGLRKDEYVG DCSDIDDVIV FTESGAMYVT KVSDKQYIEK
NIIHVAVFKK DDKRTVYNMI YKDGQTGFSY IKRFNVTGIT RDKKYELIPQ HKESRVLYFT
ANPNGEAEVV TVNLRQLGTL RKLRWDIDFA DTLIKGRGVK GNLVSKYAIK RIELKEKGVS
TLKPRKIWFD NIVKRLNTEE RGTLLGAFKG DDRMLLITKE GVVKTIIPEL SLHFENNIAV
MEKWVPEKPI SVIYYDGEKE RVFVKRFVVE NENREELVIT EHPKSQLLFV SADWRPMAEV
VFTKEKGKEK ENLIVNLEEF ISVKGIKALG NQLTTDKVKT VNTLESLPYE EPQEEEPVED
LGDEEIVPPP SENESDGTQT ELEF
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