| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0436 |
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| Symbol | |
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| ID | 8366842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 551373 |
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| End bp | 552731 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644982857 |
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| Product | phage shock protein C, PspC |
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| Protein accession | YP_003140560 |
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| Protein GI | 256819281 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1983] Putative stress-responsive transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000115043 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACAAAG TAAAAAACAT TAGTTTGGGT GGTTTTTCTT TTATCATCGA AGAAACCGCC
TATAATGCCC TCAATAACTA TCTCAATGAG GTGCGTAATC ATTTGAACCA AAATACCGAT
AGAGAAGAAA TTCTCTACGA TGTAGAGCAA CGTATGGCTG AACTACTCAA AGTTCGTCTT
AAAGAGCGCG AAGTAGTAAT CGGTCAAGAC GTGCAATATC TTATAGAAGT ATTAGGTCGT
CCCGAACAAT ACGTTGAGAG TGAAGAAACC TCTTCTGCTG AAACCAAATT TACTTTTTCT
TCTTTGAAAG GGCGAAAGCT ATACCGCGAT ATCGACGATA AGAAAATCGG TGGCGTACTC
TCAGGCATAG CCCATTATCT TCAATACGAC GTTACTTGGG TACGCATCTT CTTTCTATTA
GTCTTACTGG TGAATATCTT CATTCTTCAC TTTTTTACCT CTGCTCTGTT ACTCTTGTAT
ATTGCGTTTT GGGCTGTGGT ACCTGCCGCA CGCACAGCCG CTCAGAAGTT AGAGATGAAA
GGTGAAGCCG TAACCATCGA TACCCTTTCC AACTTCTCTT TTACGAGCAA AGAAACCCTA
AAACCTCAAA GGAATGGCTT CCCTGTCTTA CTGAAAGTAA TACTCTACTT TATTGCAATT
CTATTACTAT TGCCATTGCT TATATCCTTA ATAGCCGTAG TGCTCTCCTT ATTTGGCATA
ACCGTATTCG GAAGCATTAG TCTGCTTGCC CTTAACGATT TTCTTCCCTT TATAGTGACA
GCAACTTGGC AACACACTTT GTTGTACTTT TCAGCAGTAT TATTGCTCTT GTTTCCTGTT
TCAGTGATTT TACTGCTTTG TTTCAAACTT TTTGTAAAGG ATTTTCATAC ACCCAAAAGC
TGGATAGTGT TCAATGTACT GAGCTTAACC ATAGGTATCA TAGGAGGTTT CACAGTCTTA
GGAACTGTTT TAAGAGACTT TACCTCCGAA ACCGTCATAC AAGAAAAAAT ACCCGTTGTT
ACCACTTCCG ATACTTTGGT AGTACACCGT AACTATACTC ACAAAATGAG TCTTATGGGT
ATCAAAAACG ATAGCCTTGT GGTTGCCGAT TGTAATTTCA ATGTTAATGA ATTACCCGAA
GGCGCAGAAC CCTATATTGA AGTCTCTACC CATTCAAGAG GCAGGAACAT AGGTCAAGCC
GAACAGTATA CTAAAAATAT TCATTATACC TTACAAGTGA AAGATAACCA AATCACTATC
CCTGAAACCT ATCAAATAGC AAAAGGAGAT TTCTATCGTG CACAACGCCT GCAAATCACT
CTATTTGTTC CCAAAGGTAA GGAAGTAAAA AGAGATTAA
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| Protein sequence | MDKVKNISLG GFSFIIEETA YNALNNYLNE VRNHLNQNTD REEILYDVEQ RMAELLKVRL
KEREVVIGQD VQYLIEVLGR PEQYVESEET SSAETKFTFS SLKGRKLYRD IDDKKIGGVL
SGIAHYLQYD VTWVRIFFLL VLLVNIFILH FFTSALLLLY IAFWAVVPAA RTAAQKLEMK
GEAVTIDTLS NFSFTSKETL KPQRNGFPVL LKVILYFIAI LLLLPLLISL IAVVLSLFGI
TVFGSISLLA LNDFLPFIVT ATWQHTLLYF SAVLLLLFPV SVILLLCFKL FVKDFHTPKS
WIVFNVLSLT IGIIGGFTVL GTVLRDFTSE TVIQEKIPVV TTSDTLVVHR NYTHKMSLMG
IKNDSLVVAD CNFNVNELPE GAEPYIEVST HSRGRNIGQA EQYTKNIHYT LQVKDNQITI
PETYQIAKGD FYRAQRLQIT LFVPKGKEVK RD
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