Gene Coch_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0380 
Symbol 
ID8366786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp483928 
End bp485010 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content35% 
IMG OID644982801 
ProductDoxX family protein 
Protein accessionYP_003140504 
Protein GI256819225 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATATC TTATCCAGCT TTGTCGCATA TTATTAGGTG TTACTTTTAT CATCAGTGGA 
ATGATAAAAC TCAATGACCC AATGGGCTTT TCATTTAAAT TGGAAGACTA TTTTGCTCCC
GATGTGCTCA ATATGCCTTT TTTTGTACCA TACACTTTAA CTTTTGCCAT TTTGGTATGT
ATTTTCGAAG TAGTTTTGGG GGTAACCTTA TTGGTAGGCT ATAAAAAGAA GCTCACTTTG
TGGCTTTTGC TGGCTATGTT AGTATTCTTC GGCTTCCTCA CCTTCTATTC GGCTTATTTT
CACAAAGTAA CTGATTGTGG TTGTTTTGGT GATGCTATCA AATTTACACC TTGGCAATCG
TTTACCAAAG ATATGGTACT ATTAGTTTTA GCTCTCATCG TCTTTTGGGG GCAAAAATAT
GTACAACCCA TTACCAAAGG CAATTTACCT TTATTAATTA CAGTAATCTC TGTGCTTTTC
TGCATATGCT TTGTATATTA CGTGTACAAT CACTTACCCA TAAAAGATTT TCGCCCATAT
AAGATAGGAA CAAATATCCC CAAAGGTATG GAATTACCGC CCAATGCCGT TACTTATTAT
TGGACTTTCA AAGTAAACGG CAAAGAAAAA GTGATTGTAA CTAAAGATGC AAGTTTCCCA
AAAGTAGATG GTGAATATGT AAGCTCTACC TCTACTACCG AATTGCCTCC TATACACGAT
TTTTATATTC AAGATAAAGA TAGAGAAACA GACTATTTGC CACAATTTAT GGCAGAAGAA
AAGCTCTTGA TGGTAGTTTC TTATCGCCTC GACCTTGCTA ACCAAGAGGC TTTTAAGGCT
ATCAAAACAG TAACCGATAA AGCTCTTAAA AACGGTTATA CCGTGATAGG TCTTACCTCA
CAAATGGAGA AAGCTCCTTA TATTGTAAAG AAATACGAAC TCAATTTCAA CTTTTATTAT
AACGATGCTA CTACCCTCAA AACAATGATA CGTTCTAATC CTGGACTTAT AGTGCTTTCC
AAGGGTACTA TCATCGATAA AAAGCATTAT AACGACAGCG AAAAATTACC AATTGATAAA
TAA
 
Protein sequence
MKYLIQLCRI LLGVTFIISG MIKLNDPMGF SFKLEDYFAP DVLNMPFFVP YTLTFAILVC 
IFEVVLGVTL LVGYKKKLTL WLLLAMLVFF GFLTFYSAYF HKVTDCGCFG DAIKFTPWQS
FTKDMVLLVL ALIVFWGQKY VQPITKGNLP LLITVISVLF CICFVYYVYN HLPIKDFRPY
KIGTNIPKGM ELPPNAVTYY WTFKVNGKEK VIVTKDASFP KVDGEYVSST STTELPPIHD
FYIQDKDRET DYLPQFMAEE KLLMVVSYRL DLANQEAFKA IKTVTDKALK NGYTVIGLTS
QMEKAPYIVK KYELNFNFYY NDATTLKTMI RSNPGLIVLS KGTIIDKKHY NDSEKLPIDK