Gene Coch_0310 details

Gene Information

• Locus tag: Coch_0310
• Symbol: ruvA
• ID: 8366716
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 393511
• End bp: 394095
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 644982731
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_003140434
• Protein GI: 256819155
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.966825
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTACAC AATTACAAGG AAAACTCGTA GAAAAGAACT CTACTCACGT AGTAATCGAC 
TGCCACGGGG TGGGCTATTT TGTAAATATC AGTCTGAATA CTTATTCAGC GCTCCCCGAA 
GGAGAAGCCA TTAAGCTATA CACCTATTTG CAAATAAAAG AAGATGCCCA TACACTCTAT 
GGTTTCCTCA CCAAAGCCGA ACGCGAAGTG TTTGTATTGC TTCTTTCGGT ATCGGGAGTA 
GGTGCTAGCA CTGCCCGTAC GATGCTCTCA GCACTTACCG CTGCACAAGT GCGCAATGCT 
ATTATCAATG GCGATGTAGC TACCATTCAA GCAGTAAAAG GTATAGGTGC TAAAACAGCC 
CAACGCGTAG TACTCGACCT CAAAGACAAG ATGCTCAAGC TTCAAGACTT TGAAGAGGTG 
CCAATGAACG CTGTAAGTAC CCATAAAGAA GAAGCGCTTG CCGCCTTAGA AGTATTGGGC 
TTTATGCGCA AACAAGCCGA AAAAGTAGTC GATATCATTA TCAAATCAAG CAGCGAAGAG 
CTTTCAGTAG AAGAAATTAT CAAGCAAGCC CTCAAACGCT TGTAA 

 

Protein sequence

MITQLQGKLV EKNSTHVVID CHGVGYFVNI SLNTYSALPE GEAIKLYTYL QIKEDAHTLY 
GFLTKAEREV FVLLLSVSGV GASTARTMLS ALTAAQVRNA IINGDVATIQ AVKGIGAKTA 
QRVVLDLKDK MLKLQDFEEV PMNAVSTHKE EALAALEVLG FMRKQAEKVV DIIIKSSSEE 
LSVEEIIKQA LKRL