Gene Coch_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0302 
Symbol 
ID8366708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp383010 
End bp383396 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content41% 
IMG OID644982723 
Producthistidine triad (HIT) protein 
Protein accessionYP_003140426 
Protein GI256819147 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTT TTACAAAAAT TATCAATGGG GAAATTCCTT GCTACAAAGT AGCGGAAGAC 
GATGAGTTTA TCGCTTTTTT CGATATTAAC CCTAATGCCA AAGGGCATAC CCTCTGCGTG 
CCTAAACAAG AAATCAGCTA TATTTTTGAT ATGGATGACG ACCATTATCT GCGCTTGATG 
GCTTTCTCAA AACGTGTAGC CAAAGCTCTT GAAAAGGTAG TACCTTGCGA GCGTATAGGC 
GTAGCAGTTG TAGGTCTTGA AGTGCCTCAC GTACACGTAC ACCTCATTCC TATCAGCGAG 
ATGAAGGAAA TGACCTTCCA ACACAAAGTA AAACTTACTG ATGAAGAGTT TAAAGCGCTT 
GCGCAGAAAG TAAGAGAAGC GTTTTAG
 
Protein sequence
MSIFTKIING EIPCYKVAED DEFIAFFDIN PNAKGHTLCV PKQEISYIFD MDDDHYLRLM 
AFSKRVAKAL EKVVPCERIG VAVVGLEVPH VHVHLIPISE MKEMTFQHKV KLTDEEFKAL 
AQKVREAF