| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0269 |
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| Symbol | |
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| ID | 8366675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 346532 |
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| End bp | 349588 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644982690 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003140393 |
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| Protein GI | 256819114 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTGA AAAATTTATT AGTTTTTGTA GGTATTTTCC TTTGGGTATT ACCTTCCTTA
GCGCAAAATG TAACGATTAA GGGCTCGGTG AAAGACACTA AAGGTGAACC TATGATGGGC
GCTTTTGTCT TTATAAAAGG CACCCAACAC GGTACTTCTA CTGACTTTGA TGGCAACTAT
ACTCTCAATG CCCAAGTAGG CGATGTACTC AAATATTCAT TCTTGGGAAT GAAATCTGTC
GAAAAGAAAG TAACGGCAGG TGTAACCCAA ATAGATATCG TTCTTCAAGA CGATATTCAG
CAATTAGAAG GTACAGTGGT AACTGGCTAT GGAGGCAAAA AAATAGCCAG TCGCACGGTG
GCTTCGGTAG CTACTGTAAA AGGCAAAGAT TTTGCCGAAA CCCCTAATGC TAATATCACC
GATGCGCTAC AAGGTAAAGT GGCAGGTATG GTGGTAACTA CCGAGTCCGG AAGACCAGGA
GCAAGCTCTT CGGTACTCAT TCACGGACTC AACACGTTTA TGTCAGTTTT TGATAAGACG
ATAGTCTCAG AACCTTTGTA TATAATAGAT GGTGCCCCTG TAAGTGGCGA TATAATGACG
ATGTATAACC CTACCGATAT AGAAAGCGTA ACAGTACTCA AAGACGCTGC TTCTACTTCT
ATCTATGGAG CTCGTGCTGC CAATGGGGTG ATTTTAATTA CTACCAAAAG AGGTAAACGC
AATGAGCGCA CTCATATTAC TATTAATCAT CAGTTGGGCT TCTCAATGCG CACCAATGTA
ACTCGCAAAT TCTTTGATAA TATGGCGAGC CCACAAGAGT ATATGGACTT TTGGGTAAAA
AAAGACCCCA ATGCTATTGT TGCTTTCGGT AAGCGTTCGG GCTACACCCA AACTACGGCA
AGAGCTATCG CCGATAGTAT CTTGGCAGCA AATCCTTATA ATACACGTTG GGATAAAGTT
TTCTTTCGCG ATTTCGCTCC TATCTCACGC ACCGATGTGT CTATTTCGGG AGGAAGTAAT
ACAACCTCTT ATTACATTTC GTTGGGCTAC TTAGACCAAC AGGGTATCAA GGCGCGTTCG
GACTACAAAC GCTATAATCT CAATACTAAT TTAGACACTC AAATAACCGA TTGGCTTAAA
GCAGGACTTT CAATCTCCTT AGGAACTACC ACTGCCGAAG GAGTATCGAA TGCTGGTAGT
GAAACCGATA TATTGTCGCT TCCTATTTAT TCTCCCAAAG AGAGCGATGG GAAGAGAAAG
AATTACATTC CTTCTTTTAT TAATCGTCAA AATGGCTTTT TTCACCCTGA TTATATGGCT
GAGAAATACC CTTCTATTGA TTATACTGAG GATATATTGC CCATAGGGTA TTTATTAATA
GAACCTATTA AGAACTTAAC ATTTAAAAGC CAAGTAGGGA TACAGTATAA TGTAAACGAA
ACAGAAAGTA AAGGGCCTCT GCCTTCTTAT ATAGATTATC GTTATAGTAA TGATAGTAGC
AAAACGGTAG CACAAACCCT TCGCTATCTC AATAAATACA TACAGCGTAC TTATACTAAC
CTATTGCAAT ACAAATGGAA TATAAAGAAC CTACACGATT TTGACTTTTT ATTGGGGCAA
GAATCTATCG AAACGCTGTG GCGCTCGTTC AACGCATCGT CTAAGGGGCA ACCTTCTGAT
GCTTTATCAA TGCTCAGCCA CGGAACTAAA GAATATAATG TAGGAGATAG TCAGTCTGAA
TCAGGATTTA ATTCCTATTT TACTCGCTTA GAATACTCTT ATAAATACCG TTATTTTATA
GACCTATCAG CACGCCGTGA TGGTTCATCA GCTTTTGGTT CAAATAATCG CTATGCCAAT
TTCTGGGCGA TAGGAGGGAT GTGGAAACTC AAAGAAGAGA AGTTTTTGCA AAAGGTAAAT
TGGCTTACCA GCTTAGATTT GCGTTTTAGC ACCGGTATTT CGGGTAACTC TTCTATTGGT
GATTATCGCA ATAGAACCTT GGTAGATGCT TCAAAATTAT ATAAACAAAC CCCAGGTTAT
TTTATTGCGA TGCTCGGTAA TCCCGATATT ATGTGGGAAG AACAACAGAA AACAACACTC
GGCTTGCATA TCGGTATCGC CAAAGGTACT ACTATCAATT TTGAAGTGTA TGAGCGCAAT
ACCCATAAAA CTCTTGCACA ACGTTATATA AACTCAGCGT CGGGTTTTAC TTCTATTCCA
GATAATATAG GTGATATGCA AAATAGAGGT TTTGACCTTA CTATTTCAAC GATTGCGTAT
AGAAGTAAGA ACAATGATTT AAGCATACGT CCTTATTTCA ATATGAATTA CAATGAACAG
AAGGTAACCT CACTATTCTT GAGCAAAGAT AATTTTGTGA ATAGACTTTT TAATAATGGA
TATAGGCTAA ATGAACCATT GCAATGGGCA TTGCCAATAT TCAAGGGTAT CAATAAAGAC
GGAGATGCCG AATGGTATCA ACGAAACGAA GATAACCCTA TGATACAACA AAAAGACGAC
TCCAAAGTTA CAACCCAATT CAGTGAAGAC CTAATACAAA CTACTGGTAA GAAAATGTTT
GCACCTATCA ATGGTGGTTT TGGGCTAAGT GCTACTTATA AGAATGTATC ACTCGATTTG
GCATTTTCTT ATGCTTTGGG CAAATGGCTT ATCAATGAAG ACCGATACTA TACTTTAAAC
CAAAGCACTT TTGGAGGTAA AAATTTCAGT AAAGATTTGT TGAATTATTG GAAACAAGAA
GGTGATGATA CCGAGCTCCC TAAACTCAGC AGTGCTTATT ATATGCGCAA AGATACCCGC
TTACTCGAAA ACGCCTCTTA TATGCGCTTG AAGAGTATAA GTTTAAGTTA TGCGCTTCCT
CAGGAGGTAA TAGACCAAAT GAAATTCTTT TCAGGGGTGC GCCTATATGC ATCGGCACGT
AATATTTTTA CCATTACCAA ATATTCAGGA GCCGACCCTG AGTTTTCTAA TACATTATCA
AGAGGAGGAT ATCCACCTAC TCGCCAGTTT ACCTTAGGTG TAGAACTTAA ATTTTAA
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| Protein sequence | MNLKNLLVFV GIFLWVLPSL AQNVTIKGSV KDTKGEPMMG AFVFIKGTQH GTSTDFDGNY
TLNAQVGDVL KYSFLGMKSV EKKVTAGVTQ IDIVLQDDIQ QLEGTVVTGY GGKKIASRTV
ASVATVKGKD FAETPNANIT DALQGKVAGM VVTTESGRPG ASSSVLIHGL NTFMSVFDKT
IVSEPLYIID GAPVSGDIMT MYNPTDIESV TVLKDAASTS IYGARAANGV ILITTKRGKR
NERTHITINH QLGFSMRTNV TRKFFDNMAS PQEYMDFWVK KDPNAIVAFG KRSGYTQTTA
RAIADSILAA NPYNTRWDKV FFRDFAPISR TDVSISGGSN TTSYYISLGY LDQQGIKARS
DYKRYNLNTN LDTQITDWLK AGLSISLGTT TAEGVSNAGS ETDILSLPIY SPKESDGKRK
NYIPSFINRQ NGFFHPDYMA EKYPSIDYTE DILPIGYLLI EPIKNLTFKS QVGIQYNVNE
TESKGPLPSY IDYRYSNDSS KTVAQTLRYL NKYIQRTYTN LLQYKWNIKN LHDFDFLLGQ
ESIETLWRSF NASSKGQPSD ALSMLSHGTK EYNVGDSQSE SGFNSYFTRL EYSYKYRYFI
DLSARRDGSS AFGSNNRYAN FWAIGGMWKL KEEKFLQKVN WLTSLDLRFS TGISGNSSIG
DYRNRTLVDA SKLYKQTPGY FIAMLGNPDI MWEEQQKTTL GLHIGIAKGT TINFEVYERN
THKTLAQRYI NSASGFTSIP DNIGDMQNRG FDLTISTIAY RSKNNDLSIR PYFNMNYNEQ
KVTSLFLSKD NFVNRLFNNG YRLNEPLQWA LPIFKGINKD GDAEWYQRNE DNPMIQQKDD
SKVTTQFSED LIQTTGKKMF APINGGFGLS ATYKNVSLDL AFSYALGKWL INEDRYYTLN
QSTFGGKNFS KDLLNYWKQE GDDTELPKLS SAYYMRKDTR LLENASYMRL KSISLSYALP
QEVIDQMKFF SGVRLYASAR NIFTITKYSG ADPEFSNTLS RGGYPPTRQF TLGVELKF
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