| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0268 |
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| Symbol | |
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| ID | 8366674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 345014 |
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| End bp | 346522 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644982689 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003140392 |
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| Protein GI | 256819113 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.223566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TAATATATAC AGCAGTTTTA TGTTCTTTTT TGGTGTTGTT GCCTACGGGT
TGTGCTCGTT TGGATTTAGA CCCTTATAAT TACGCTAGTG AAAATACAAG TTTTAAGAAT
AAGCGTGATG CCCAAATGTG GGTAAATGGG ATGTATAACG CTTTGCGTGA TTACAATCAG
GGGCAACAGA TGTATGCCTC AGACCTCCAA GCCGATTATC TCAACGCAGC TGCGGGAGCA
ATGGAAAAAT TGCCCGATAT GCATCGTTGG TCTATTTTTG CTTCTTCAGA GCAGGCTACT
GCCTCTATAT GGAAAGAACG ATTCCTTATC ATTCAAGATA TAAACACGGG TATTAAGGGC
TTCCCTAATA TACCTGAGCA ATCAGAAATA CAAGAACTTA CAGGAGCTCT TTACTTAGGG
CGTGCCTATT GCTATACCTA TTTGGTTACG CACTTCTGCA AGCCTTATAA CAGTAGTACA
GCAACTACCG ATTTAGGTTT ACCTCTGCTT ACAGCTCCTA CGCTCAAGAA CTTTCCTACG
CGCAGTAGTG TAGCCGAAAC CTATGATTTT ATACTCAGTG ATATTCAGAA AGCTGAAACC
TTATTGGCAA ACCAAACAGG AGCAGCAGGA GCTGATACTT TCACCCTCGA TGCTGCCAGA
GCTCTCAAAG CAAGAGTCTT GCTCTATAAA AATGATTGGG CACAAGCCTA CCAAGTAGCA
GTAGCACTTA TCAATACTAA TCGCTATCCA CTGGCTACCT CTGCCGATGC TTTCAAGAAA
ATATGGACAG AAGATGATAA TACCGAGAGT ATTATCCAGT TATACGCAGC TGTCAATGCA
GGAGTTTATG AAACTTCTGA TAATACCAAT GAGCTCTATT TAGGCGAAAG TGAAAGTTTC
TTTTTCCCAG GACAGATAGA CGCTAATCCT AATGTGTTGC CTACTAAGGA TTTTATAGAT
TTATTTACTA CTGGCGACTG GCGAAAAGAT GTTTTCTTGA AAGAAGTAAC CGTAGGGTTT
AGCTTTCTTT ATGCTGTAAA CAAGTATCCT CGAAATAGAG AATTAGAACC TATTGATAGT
TATAATTTTT ATTATGGGCA TAAGGCTAAG CTTTTTCGCA TAGCTGAGAC TTACCTTATA
GCAGCCGAAG CTGCCTATAA GAACAATGAT GAAACTAATG CTAAAAAGTA CTTAAACCTA
TTACGTGCTG CAAGAGGGCT TAGTGCTATT ACTACCTCAG GAAGCAACCT TTTTGCCGAC
ATACAAAACG AGCGCAATAG AGAGTTAGCT TTTGAAGATT TCCGCCTGTA TGACCTTAAT
CGCTGGGGAT TGCCTGTAAA AAGAGGCACT CCTCAGGATG TAACGACTAT TAGGAATACT
CCTGCCTCTG ATTATAGTGA ACTCAATATT CAGGTAGGAA GTAATTACTA TTACAAAATA
GTATGGCCTA TACCAGTAGA TGATATAGAC TACGAACAAG GCAATTGGAA ACAAAATCCT
AATTGGTAA
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| Protein sequence | MKKIIYTAVL CSFLVLLPTG CARLDLDPYN YASENTSFKN KRDAQMWVNG MYNALRDYNQ
GQQMYASDLQ ADYLNAAAGA MEKLPDMHRW SIFASSEQAT ASIWKERFLI IQDINTGIKG
FPNIPEQSEI QELTGALYLG RAYCYTYLVT HFCKPYNSST ATTDLGLPLL TAPTLKNFPT
RSSVAETYDF ILSDIQKAET LLANQTGAAG ADTFTLDAAR ALKARVLLYK NDWAQAYQVA
VALINTNRYP LATSADAFKK IWTEDDNTES IIQLYAAVNA GVYETSDNTN ELYLGESESF
FFPGQIDANP NVLPTKDFID LFTTGDWRKD VFLKEVTVGF SFLYAVNKYP RNRELEPIDS
YNFYYGHKAK LFRIAETYLI AAEAAYKNND ETNAKKYLNL LRAARGLSAI TTSGSNLFAD
IQNERNRELA FEDFRLYDLN RWGLPVKRGT PQDVTTIRNT PASDYSELNI QVGSNYYYKI
VWPIPVDDID YEQGNWKQNP NW
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